RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 E5RGE8 158 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 MRPS12O15235 138 aaKnown RBP14.72□□□□□ -0.05
SS18-224ENST00000584083 SSNA1O43805 119 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 SNRPCP09234 159 aaKnown RBP14.72□□□□□ -0.05
SS18-224ENST00000584083 CXCL3P19876 107 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 PRR20EP86478 221 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 PRR20CP86479 221 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 PRR20DP86480 221 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 PRR20BP86481 221 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 PRR20AP86496 221 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 OR1L4Q8NGR5 311 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 C2CD4CQ8TF44 421 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 NEU1Q99519 415 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 SLC25A31Q9H0C2 315 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 OR5AC2Q9NZP5 309 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 ALMS1Q8TCU4 4167 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 A8MTW9 85 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 C11orf94C9JXX5 98 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 RPL29P47914 159 aaKnown RBP14.71□□□□□ -0.05
SS18-224ENST00000584083 NHLH2Q02577 135 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 OPCMLQ14982 345 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 PSG3Q16557 428 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 MORN5Q5VZ52 161 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 LCN15Q6UWW0 184 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 AMTNQ6UX39 209 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 PFDN5Q99471 154 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 SLC39A9Q9NUM3 307 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 CELA1Q9UNI1 258 aa14.71□□□□□ -0.05
SS18-224ENST00000584083 EMP1P54849 157 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 B2MP61769 119 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 Q6ZTC4 211 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 OR11H7Q8NGC8 314 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 RFNGQ9Y644 331 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 PXMP4Q9Y6I8 212 aa14.7□□□□□ -0.06
SS18-224ENST00000584083 PLECQ15149 4684 aaKnown RBP14.69□□□□□ -0.06
SS18-224ENST00000584083 MPDU1O75352 247 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 AMBPP02760 352 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 CXCL2P19875 107 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 H2BFSP57053 126 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 RHOBP62745 196 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 HIST1H1AQ02539 215 aaPredicted RBP14.69□□□□□ -0.06
SS18-224ENST00000584083 SPINK13Q1W4C9 94 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 ZNF767PQ75MW2 155 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 C1orf158Q8N1D5 194 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 OR8A1Q8NGG7 326 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 OR5C1Q8NGR4 320 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 IGF2BP2-AS1Q96M15 143 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 SLC50A1Q9BRV3 221 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 TMEM208Q9BTX3 173 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 PPP1R14DQ9NXH3 145 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 DNAH1Q9P2D7 4330 aa14.69□□□□□ -0.06
SS18-224ENST00000584083 TRAV10A0A0B4J240 114 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 TRAV5A0A0B4J249 113 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 TMEM189A5PLL7 270 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 IGLL5B9A064 214 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 H0YIZ8 118 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 H3BTX0 84 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 M0R2Z0 102 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 HBE1P02100 147 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 PRB4P10163 310 aaPredicted RBP14.68□□□□□ -0.06
SS18-224ENST00000584083 CHAC2Q8WUX2 184 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 PPP1R1CQ8WVI7 109 aa14.68□□□□□ -0.06
SS18-224ENST00000584083 RPUSD4Q96CM3 377 aaKnown RBP14.68□□□□□ -0.06
SS18-224ENST00000584083 ZNF331Q9NQX6 463 aaPredicted RBP14.68□□□□□ -0.06
SS18-224ENST00000584083 CLINT1Q14677 625 aa14.67□□□□□ -0.06
SS18-224ENST00000584083 C12orf74Q32Q52 190 aa14.67□□□□□ -0.06
SS18-224ENST00000584083 THAP6Q8TBB0 222 aa14.67□□□□□ -0.06
SS18-224ENST00000584083 HYDINQ4G0P3 5121 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 H3BQ15 152 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 INSP01308 110 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 SPART-AS1P0CW21 52 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 IGLC2P0DOY2 106 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 RRN3P1Q2M238 152 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 NPCDR1Q9BY65 106 aa14.66□□□□□ -0.06
SS18-224ENST00000584083 LOC102723971A0A1B0GUV8 181 aa14.65□□□□□ -0.06
SS18-224ENST00000584083 BOLA2-SMG1P6H3BVE0 249 aa14.65□□□□□ -0.06
SS18-224ENST00000584083 SLC17A3O00476 420 aa14.65□□□□□ -0.06
SS18-224ENST00000584083 TCTAP57738 103 aa14.65□□□□□ -0.06
SS18-224ENST00000584083 GUK1Q16774 197 aa14.65□□□□□ -0.06
SS18-224ENST00000584083 DEFB131BA0A096LNP1 70 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 MPC2O95563 127 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 PET100P0DJ07 73 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 LGALS9CQ6DKI2 356 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 BAP18Q8IXM2 172 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 RNF126Q9BV68 326 aa14.64□□□□□ -0.07
SS18-224ENST00000584083 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
SS18-224ENST00000584083 CRXO43186 299 aaPredicted RBP14.63□□□□□ -0.07
SS18-224ENST00000584083 OR10J6PQ8NGY7 276 aa14.63□□□□□ -0.07
SS18-224ENST00000584083 SAT2Q96F10 170 aaPredicted RBP14.63□□□□□ -0.07
SS18-224ENST00000584083 GCSAMLQ5JQS6 135 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 FAM222AQ5U5X8 452 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 KCNIP2Q9NS61 270 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 ZNF586Q9NXT0 402 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 DKK2Q9UBU2 259 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 APLNQ9ULZ1 77 aa14.62□□□□□ -0.07
SS18-224ENST00000584083 TEX48A0A1B0GUV7 120 aa14.61□□□□□ -0.07
SS18-224ENST00000584083 ZNF705GA8MUZ8 300 aaPredicted RBP14.61□□□□□ -0.07
SS18-224ENST00000584083 NIPSNAP3BQ9BS92 247 aa14.61□□□□□ -0.07
SS18-224ENST00000584083 WDR61Q9GZS3 305 aaKnown RBP14.61□□□□□ -0.07
SS18-224ENST00000584083 YTHDF2Q9Y5A9 579 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms