RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CRYBB3P26998 211 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 UNQ9165/PRO28630Q6UXU0 137 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 Q9H3A6 140 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 TRBV19A0A075B6N1 114 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 BUB3O43684 328 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 CD28P10747 220 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
SRSF1-204ENST00000581979 TMEM241Q24JQ0 296 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 RPEL1Q2QD12 228 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 C1QL4Q86Z23 238 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 C11orf52Q96A22 123 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
SRSF1-204ENST00000581979 ADARB2-AS1A8MUL3 147 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
SRSF1-204ENST00000581979 SLC25A5P05141 298 aaKnown RBP9.6□□□□□ -0.87
SRSF1-204ENST00000581979 FAM106AQ4KMX7 169 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 KHDC1LQ5JSQ8 128 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 KPRPQ5T749 579 aaPredicted RBP9.6□□□□□ -0.87
SRSF1-204ENST00000581979 TMEM190Q8WZ59 177 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 GPR82Q96P67 336 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 SDF2L1Q9HCN8 221 aa9.6□□□□□ -0.87
SRSF1-204ENST00000581979 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 MYCNOSP40205 109 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 AKR1C3P42330 323 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 PNRC1Q12796 327 aaPredicted RBP9.59□□□□□ -0.87
SRSF1-204ENST00000581979 RHEBQ15382 184 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 C1orf194Q5T5A4 169 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 C17orf77Q96MU5 243 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 CITED2Q99967 270 aaPredicted RBP9.59□□□□□ -0.87
SRSF1-204ENST00000581979 TCEAL7Q9BRU2 100 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 OTORQ9NRC9 128 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 RPH3ALQ9UNE2 315 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 NOTCH3Q9UM47 2321 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 C7orf77A4D0Y5 90 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 ZNF785A8K8V0 405 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 G3V4G9 280 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 PEX7O00628 323 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 GALR1P47211 349 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 ADIRFQ15847 76 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 GPHB5Q86YW7 130 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 EXOC3-AS1Q8N2X6 119 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 U3KQE9 123 aa9.59□□□□□ -0.87
SRSF1-204ENST00000581979 IGHV4OR15-8A0A075B7B6 117 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 A0A087WW49 117 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 HELTA6NFD8 242 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 RPL35P42766 123 aaKnown RBP9.58□□□□□ -0.88
SRSF1-204ENST00000581979 CDX1P47902 265 aaPredicted RBP9.58□□□□□ -0.88
SRSF1-204ENST00000581979 GNG5P63218 68 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 PSG9Q00887 426 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 PDE6HQ13956 83 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 LYPD1Q8N2G4 141 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 C5orf17Q8NAS9 161 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 CMTM2Q8TAZ6 248 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 HIST1H2BAQ96A08 127 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 GRAMD2BQ96HH9 432 aa9.58□□□□□ -0.88
SRSF1-204ENST00000581979 A0A1W2PS18 150 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 SLC17A3O00476 420 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 CNN1P51911 297 aaKnown RBP9.57□□□□□ -0.88
SRSF1-204ENST00000581979 RPL23P62829 140 aaKnown RBP9.57□□□□□ -0.88
SRSF1-204ENST00000581979 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 SIGLEC15Q6ZMC9 328 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 C2CD4CQ8TF44 421 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 AAMDCQ9H7C9 122 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
SRSF1-204ENST00000581979 UFC1Q9Y3C8 167 aa9.57□□□□□ -0.88
SRSF1-204ENST00000581979 A0A087X0K7 114 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 B4DEV8 164 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 K7EMT4 169 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 TM4SF20Q53R12 229 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 C9JCJ5 164 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 GNG4P50150 75 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
SRSF1-204ENST00000581979 KLHL30-AS1Q8NEE0 82 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 DPF1Q92782 380 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 ATG101Q9BSB4 218 aa9.56□□□□□ -0.88
SRSF1-204ENST00000581979 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 LINC01619G3V211 115 aa9.55□□□□□ -0.88
SRSF1-204ENST00000581979 DNASE2O00115 360 aaPredicted RBP9.55□□□□□ -0.88
SRSF1-204ENST00000581979 ZNF253O75346 499 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms