RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 A8MTW9 85 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 ZNF705EA8MWA4 302 aaPredicted RBP14.58□□□□□ -0.08
SS18-218ENST00000581021 MPDU1O75352 247 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 ZNF705DP0CH99 300 aaPredicted RBP14.58□□□□□ -0.08
SS18-218ENST00000581021 ZNF705BP0CI00 300 aaPredicted RBP14.58□□□□□ -0.08
SS18-218ENST00000581021 PET100P0DJ07 73 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 RPL12P30050 165 aaKnown RBP14.58□□□□□ -0.08
SS18-218ENST00000581021 TMEM41BQ5BJD5 291 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 AMTNQ6UX39 209 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 OR4B1Q8NGF8 309 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 CLUHP3Q96NS8 147 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 SMIM3Q9BZL3 60 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 MED28Q9H204 178 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 C11orf68Q9H3H3 251 aaKnown RBP14.58□□□□□ -0.08
SS18-218ENST00000581021 WFDC1Q9HC57 220 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 RYR2Q92736 4967 aa14.58□□□□□ -0.08
SS18-218ENST00000581021 RBMY1A1P0DJD3 496 aaKnown RBP14.57□□□□□ -0.08
SS18-218ENST00000581021 RBMY1CP0DJD4 496 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 OXA1LQ15070 435 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 RBMY1FQ15415 496 aaKnown RBP14.57□□□□□ -0.08
SS18-218ENST00000581021 RGS21Q2M5E4 152 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 Q5BKY6 102 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 S100A7AQ86SG5 101 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 OR1L4Q8NGR5 311 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 ATP5SQ99766 215 aa14.57□□□□□ -0.08
SS18-218ENST00000581021 IGHV4-28A0A0C4DH34 117 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 PMS2P11Q13670 270 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 SPATA31B1PQ5VZV4 182 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 EBLN2Q6P2I7 272 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 BPIFA4PQ86YQ2 179 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 PFDN5Q99471 154 aa14.56□□□□□ -0.08
SS18-218ENST00000581021 ZNF331Q9NQX6 463 aaPredicted RBP14.56□□□□□ -0.08
SS18-218ENST00000581021 CNN1P51911 297 aaKnown RBP14.55□□□□□ -0.08
SS18-218ENST00000581021 ZNF738Q8NE65 137 aa14.55□□□□□ -0.08
SS18-218ENST00000581021 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
SS18-218ENST00000581021 RFNGQ9Y644 331 aa14.55□□□□□ -0.08
SS18-218ENST00000581021 CXCL2P19875 107 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 NUTF2P61970 127 aaKnown RBP14.54□□□□□ -0.08
SS18-218ENST00000581021 PSG9Q00887 426 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 PSG3Q16557 428 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 LCN15Q6UWW0 184 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 HRH4Q9H3N8 390 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 ZNF586Q9NXT0 402 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 RNF24Q9Y225 148 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 DNAH1Q9P2D7 4330 aa14.54□□□□□ -0.08
SS18-218ENST00000581021 NANOS2P60321 138 aaKnown RBP14.53□□□□□ -0.08
SS18-218ENST00000581021 ZNF705AQ6ZN79 300 aaPredicted RBP14.53□□□□□ -0.08
SS18-218ENST00000581021 MIR17HGQ75NE6 70 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 FAM167A-AS1Q96KT0 104 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 SLC25A2Q9BXI2 301 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 C1QTNF4Q9BXJ3 329 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 MFFQ9GZY8 342 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 ALMS1Q8TCU4 4167 aa14.53□□□□□ -0.08
SS18-218ENST00000581021 CXorf65A6NEN9 183 aa14.52□□□□□ -0.09
SS18-218ENST00000581021 ZNF705FA8MVS1 300 aaPredicted RBP14.52□□□□□ -0.09
SS18-218ENST00000581021 PRAC2D3DTV9 90 aa14.52□□□□□ -0.09
SS18-218ENST00000581021 PYYP10082 97 aa14.52□□□□□ -0.09
SS18-218ENST00000581021 OR8A1Q8NGG7 326 aa14.52□□□□□ -0.09
SS18-218ENST00000581021 GIPP09681 153 aaPredicted RBP14.51□□□□□ -0.09
SS18-218ENST00000581021 MIFP14174 115 aa14.51□□□□□ -0.09
SS18-218ENST00000581021 C1orf158Q8N1D5 194 aa14.51□□□□□ -0.09
SS18-218ENST00000581021 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
SS18-218ENST00000581021 RPUSD4Q96CM3 377 aaKnown RBP14.51□□□□□ -0.09
SS18-218ENST00000581021 SLC50A1Q9BRV3 221 aa14.51□□□□□ -0.09
SS18-218ENST00000581021 TMEM14CQ9P0S9 112 aa14.51□□□□□ -0.09
SS18-218ENST00000581021 G3V3Q6 166 aa14.5□□□□□ -0.09
SS18-218ENST00000581021 M0R2Z0 102 aa14.5□□□□□ -0.09
SS18-218ENST00000581021 CRXO43186 299 aaPredicted RBP14.5□□□□□ -0.09
SS18-218ENST00000581021 NDUFB4O95168 129 aa14.5□□□□□ -0.09
SS18-218ENST00000581021 HIST1H1AQ02539 215 aaPredicted RBP14.5□□□□□ -0.09
SS18-218ENST00000581021 SPINK13Q1W4C9 94 aa14.5□□□□□ -0.09
SS18-218ENST00000581021 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
SS18-218ENST00000581021 LCE6AA0A183 80 aa14.49□□□□□ -0.09
SS18-218ENST00000581021 DUSP14O95147 198 aaKnown RBP14.49□□□□□ -0.09
SS18-218ENST00000581021 C11orf45Q8TAV5 145 aa14.49□□□□□ -0.09
SS18-218ENST00000581021 CELA1Q9UNI1 258 aa14.49□□□□□ -0.09
SS18-218ENST00000581021 IGHV3OR16-12A0A075B7B8 117 aa14.48□□□□□ -0.09
SS18-218ENST00000581021 EIF3GO75821 320 aaKnown RBP eCLIP14.48□□□□□ -0.09
SS18-218ENST00000581021 BAP18Q8IXM2 172 aa14.48□□□□□ -0.09
SS18-218ENST00000581021 AQP10Q96PS8 301 aa14.48□□□□□ -0.09
SS18-218ENST00000581021 PARD6GQ9BYG4 376 aaPredicted RBP14.48□□□□□ -0.09
SS18-218ENST00000581021 KCNIP2Q9NS61 270 aa14.48□□□□□ -0.09
SS18-218ENST00000581021 IFNA5P01569 189 aa14.47□□□□□ -0.09
SS18-218ENST00000581021 GUK1Q16774 197 aa14.47□□□□□ -0.09
SS18-218ENST00000581021 FFAR4Q5NUL3 377 aa14.47□□□□□ -0.09
SS18-218ENST00000581021 CEMP1Q6PRD7 247 aaPredicted RBP14.47□□□□□ -0.09
SS18-218ENST00000581021 ZNF503Q96F45 646 aa14.47□□□□□ -0.09
SS18-218ENST00000581021 RNF222A6NCQ9 220 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 C17orf112F2Z3M2 114 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 BOLA2-SMG1P6H3BVE0 249 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 M0R3E3 92 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 ZNF253O75346 499 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 HIST1H1EP10412 219 aaKnown RBP14.46□□□□□ -0.09
SS18-218ENST00000581021 SCGB1C1Q8TD33 95 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 PHLDA1Q8WV24 401 aaPredicted RBP14.46□□□□□ -0.09
SS18-218ENST00000581021 ASB13Q8WXK3 278 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 FXYD5Q96DB9 178 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 IGF2BP2-AS1Q96M15 143 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 NEU1Q99519 415 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 MRPL32Q9BYC8 188 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms