RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-215	ENST00000580182		X6R8D5	127 aa		13.55	□□□□□ -0.24
PPP4R1-215	ENST00000580182	MPDU1	O75352	247 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	RPL12	P30050	165 aa	Known RBP	13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	PMS2P11	Q13670	270 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	BPIFA4P	Q86YQ2	179 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	ZNF709	Q8N972	641 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	LRRC20	Q8TCA0	184 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	PFDN5	Q99471	154 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	SMIM3	Q9BZL3	60 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	WDR61	Q9GZS3	305 aa	Known RBP	13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	RNF24	Q9Y225	148 aa		13.54	□□□□□ -0.24
PPP4R1-215	ENST00000580182	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182		H3BQ15	152 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	PLEC	Q15149	4684 aa	Known RBP	13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	RGS21	Q2M5E4	152 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	SPATA31B1P	Q5VZV4	182 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182		Q8NAQ8	132 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	ZNF738	Q8NE65	137 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	CLUHP3	Q96NS8	147 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	ATP5S	Q99766	215 aa		13.53	□□□□□ -0.24
PPP4R1-215	ENST00000580182	IGHV4-28	A0A0C4DH34	117 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SLC17A3	O00476	420 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RBMY1A1	P0DJD3	496 aa	Known RBP	13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RBMY1C	P0DJD4	496 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	IGLC2	P0DOY2	106 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	PSG9	Q00887	426 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RBMY1F	Q15415	496 aa	Known RBP	13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	PSG3	Q16557	428 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	C1QTNF4	Q9BXJ3	329 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	C11orf68	Q9H3H3	251 aa	Known RBP	13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	WFDC1	Q9HC57	220 aa		13.52	□□□□□ -0.25
PPP4R1-215	ENST00000580182	CXorf65	A6NEN9	183 aa		13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182	CNN1	P51911	297 aa	Known RBP	13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182		Q5BKY6	102 aa		13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182	LCN15	Q6UWW0	184 aa		13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182	AMTN	Q6UX39	209 aa		13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.51	□□□□□ -0.25
PPP4R1-215	ENST00000580182	LYST	Q99698	3801 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182		A8MTW9	85 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	CXCL2	P19875	107 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	OXA1L	Q15070	435 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SAT2	Q96F10	170 aa	Predicted RBP	13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	MFF	Q9GZY8	342 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	HRH4	Q9H3N8	390 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	ZNF586	Q9NXT0	402 aa		13.5	□□□□□ -0.25
PPP4R1-215	ENST00000580182	TENM2	Q9NT68	2774 aa		13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	MIF	P14174	115 aa		13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	NANOS2	P60321	138 aa	Known RBP	13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SLC50A1	Q9BRV3	221 aa		13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RFNG	Q9Y644	331 aa		13.49	□□□□□ -0.25
PPP4R1-215	ENST00000580182	IGHV3OR16-12	A0A075B7B8	117 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	DUSP14	O95147	198 aa	Known RBP	13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	PYY	P10082	97 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	HIST1H1A	Q02539	215 aa	Predicted RBP	13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	MIR17HG	Q75NE6	70 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	OR8A1	Q8NGG7	326 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	C11orf45	Q8TAV5	145 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RPUSD4	Q96CM3	377 aa	Known RBP	13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SLC25A2	Q9BXI2	301 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	RYR2	Q92736	4967 aa		13.48	□□□□□ -0.25
PPP4R1-215	ENST00000580182	PRAC2	D3DTV9	90 aa		13.47	□□□□□ -0.25
PPP4R1-215	ENST00000580182	C17orf112	F2Z3M2	114 aa		13.47	□□□□□ -0.25
PPP4R1-215	ENST00000580182		M0R2Z0	102 aa		13.47	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SPINK13	Q1W4C9	94 aa		13.47	□□□□□ -0.25
PPP4R1-215	ENST00000580182	IFNA5	P01569	189 aa		13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	GIP	P09681	153 aa	Predicted RBP	13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	C1orf158	Q8N1D5	194 aa		13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	SCGB1C1	Q8TD33	95 aa		13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	FAM167A-AS1	Q96KT0	104 aa		13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	TMEM14C	Q9P0S9	112 aa		13.46	□□□□□ -0.25
PPP4R1-215	ENST00000580182	TRBV19	A0A075B6N1	114 aa		13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	CRX	O43186	299 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	GUK1	Q16774	197 aa		13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	FFAR4	Q5NUL3	377 aa		13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	KCNIP2	Q9NS61	270 aa		13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	DNAH1	Q9P2D7	4330 aa		13.45	□□□□□ -0.26
PPP4R1-215	ENST00000580182	TRAV12-2	A0A075B6T6	113 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	LCE6A	A0A183	80 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	NDUFB4	O95168	129 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	HIST1H1E	P10412	219 aa	Known RBP	13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	RHOB	P62745	196 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	BAP18	Q8IXM2	172 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	BLNK	Q8WV28	456 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	CELA1	Q9UNI1	258 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	FUT9	Q9Y231	359 aa		13.44	□□□□□ -0.26
PPP4R1-215	ENST00000580182	NUPR2	A6NF83	97 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	EIF3G	O75821	320 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	IGF2BP2-AS1	Q96M15	143 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	AQP10	Q96PS8	301 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	NEU1	Q99519	415 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	GOLT1B	Q9Y3E0	138 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	ALMS1	Q8TCU4	4167 aa		13.43	□□□□□ -0.26
PPP4R1-215	ENST00000580182	BOLA2-SMG1P6	H3BVE0	249 aa		13.42	□□□□□ -0.26
PPP4R1-215	ENST00000580182		M0R3E3	92 aa		13.42	□□□□□ -0.26
PPP4R1-215	ENST00000580182	ZNF253	O75346	499 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms