RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 RPL7L1Q6DKI1 246 aaKnown RBP17.43■□□□□ 0.38
ERBB2-209ENST00000578709 Q6ZWC4 215 aa17.43■□□□□ 0.38
ERBB2-209ENST00000578709 OR2G3Q8NGZ4 309 aa17.43■□□□□ 0.38
ERBB2-209ENST00000578709 SLC25A2Q9BXI2 301 aa17.43■□□□□ 0.38
ERBB2-209ENST00000578709 SAV1Q9H4B6 383 aaPredicted RBP17.43■□□□□ 0.38
ERBB2-209ENST00000578709 RPRMQ9NS64 109 aa17.43■□□□□ 0.38
ERBB2-209ENST00000578709 HLA-DRB4X5D2U9 266 aa17.43■□□□□ 0.38
ERBB2-209ENST00000578709 ATP6V0CP27449 155 aa17.42■□□□□ 0.38
ERBB2-209ENST00000578709 IGFL4Q6B9Z1 124 aa17.42■□□□□ 0.38
ERBB2-209ENST00000578709 TCTE3Q8IZS6 198 aa17.42■□□□□ 0.38
ERBB2-209ENST00000578709 SLC50A1Q9BRV3 221 aa17.42■□□□□ 0.38
ERBB2-209ENST00000578709 RETNQ9HD89 108 aa17.42■□□□□ 0.38
ERBB2-209ENST00000578709 ZNF331Q9NQX6 463 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-209ENST00000578709 M6PRP20645 277 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 DEFB1P60022 68 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 RHOBP62745 196 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 ACOT6Q3I5F7 207 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-209ENST00000578709 GDF5OSQ5U4N7 250 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 KCNRGQ8N5I3 272 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 RNF182Q8N6D2 247 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 LRRC20Q8TCA0 184 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 SAT2Q96F10 170 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-209ENST00000578709 ZNF586Q9NXT0 402 aa17.41■□□□□ 0.38
ERBB2-209ENST00000578709 SLC17A3O00476 420 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 ZNF253O75346 499 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 SNRPCP09234 159 aaKnown RBP17.4■□□□□ 0.38
ERBB2-209ENST00000578709 HIST1H1EP10412 219 aaKnown RBP17.4■□□□□ 0.38
ERBB2-209ENST00000578709 SPP1P10451 314 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 MORN3Q6PF18 240 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-209ENST00000578709 GNPNAT1Q96EK6 184 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-209ENST00000578709 CLUHP3Q96NS8 147 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 CYTL1Q9NRR1 136 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 TP53TG1Q9Y2A0 90 aa17.4■□□□□ 0.38
ERBB2-209ENST00000578709 hCG_2014768A0A024R1R8 64 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 A0A0J9YX75 114 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 H3BTX0 84 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 JTBO76095 146 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 GIG44P09565 113 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-209ENST00000578709 PYYP10082 97 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 SERF2P84101 59 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 PSG3Q16557 428 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 OVOL2Q9BRP0 275 aa17.39■□□□□ 0.37
ERBB2-209ENST00000578709 TRBV19A0A075B6N1 114 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 F6UB75 175 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 HLA-DMBP28068 263 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 RAB2AP61019 212 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 DEFB135Q30KP9 77 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 EBLN2Q6P2I7 272 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 RNF183Q96D59 192 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 SH3BGRL3Q9H299 93 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 CLEC5AQ9NY25 188 aa17.38■□□□□ 0.37
ERBB2-209ENST00000578709 A0A0D9SG52 128 aa17.37■□□□□ 0.37
ERBB2-209ENST00000578709 CA1P00915 261 aaPredicted RBP17.37■□□□□ 0.37
ERBB2-209ENST00000578709 PDE6HQ13956 83 aa17.37■□□□□ 0.37
ERBB2-209ENST00000578709 ZNF738Q8NE65 137 aa17.37■□□□□ 0.37
ERBB2-209ENST00000578709 ARPC5LQ9BPX5 153 aa17.37■□□□□ 0.37
ERBB2-209ENST00000578709 OR51M1Q9H341 326 aa17.37■□□□□ 0.37
ERBB2-209ENST00000578709 A8MTW9 85 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 SPRY2O43597 315 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 TAS2R45P59539 299 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 KHDC3LQ587J8 217 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 TMEM41BQ5BJD5 291 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 OR10G4Q8NGN3 311 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 OR10G9Q8NGN4 311 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 OR10G7Q8NGN6 311 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 FXYD5Q96DB9 178 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 ZNF503Q96F45 646 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 PAXXQ9BUH6 204 aa17.36■□□□□ 0.37
ERBB2-209ENST00000578709 NDUFB4O95168 129 aa17.35■□□□□ 0.37
ERBB2-209ENST00000578709 MBP02144 154 aa17.35■□□□□ 0.37
ERBB2-209ENST00000578709 C4BPBP20851 252 aa17.35■□□□□ 0.37
ERBB2-209ENST00000578709 A0A1W2PPV4 95 aa17.34■□□□□ 0.37
ERBB2-209ENST00000578709 OR7C2O60412 319 aa17.34■□□□□ 0.37
ERBB2-209ENST00000578709 NBEAP1P0C6P0 100 aa17.34■□□□□ 0.37
ERBB2-209ENST00000578709 NUTF2P61970 127 aaKnown RBP17.34■□□□□ 0.37
ERBB2-209ENST00000578709 AKAP14Q86UN6 197 aa17.34■□□□□ 0.37
ERBB2-209ENST00000578709 RPP25LQ8N5L8 163 aaKnown RBP17.34■□□□□ 0.37
ERBB2-209ENST00000578709 RNF141Q8WVD5 230 aa17.34■□□□□ 0.37
ERBB2-209ENST00000578709 RPUSD4Q96CM3 377 aaKnown RBP17.34■□□□□ 0.37
ERBB2-209ENST00000578709 C1QBP02746 253 aa17.33■□□□□ 0.36
ERBB2-209ENST00000578709 PSG9Q00887 426 aa17.33■□□□□ 0.36
ERBB2-209ENST00000578709 FAM122CQ6P4D5 195 aa17.33■□□□□ 0.36
ERBB2-209ENST00000578709 OR4B1Q8NGF8 309 aa17.33■□□□□ 0.36
ERBB2-209ENST00000578709 BLNKQ8WV28 456 aa17.33■□□□□ 0.36
ERBB2-209ENST00000578709 A0A1B0GVG6 124 aa17.32■□□□□ 0.36
ERBB2-209ENST00000578709 BCL2L11O43521 198 aa17.32■□□□□ 0.36
ERBB2-209ENST00000578709 DUSP14O95147 198 aaKnown RBP17.32■□□□□ 0.36
ERBB2-209ENST00000578709 OR10J4P0C629 311 aa17.32■□□□□ 0.36
ERBB2-209ENST00000578709 PQLC2Q6ZP29 291 aa17.32■□□□□ 0.36
ERBB2-209ENST00000578709 OR8A1Q8NGG7 326 aa17.32■□□□□ 0.36
ERBB2-209ENST00000578709 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
ERBB2-209ENST00000578709 ZNF705FA8MVS1 300 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-209ENST00000578709 IGKV3-20P01619 116 aa17.31■□□□□ 0.36
ERBB2-209ENST00000578709 CDC34P49427 236 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-209ENST00000578709 CNN1P51911 297 aaKnown RBP17.31■□□□□ 0.36
ERBB2-209ENST00000578709 AMTNQ6UX39 209 aa17.31■□□□□ 0.36
ERBB2-209ENST00000578709 WWC2-AS2Q96NR7 200 aa17.31■□□□□ 0.36
ERBB2-209ENST00000578709 C1QTNF4Q9BXJ3 329 aa17.31■□□□□ 0.36
ERBB2-209ENST00000578709 KANTRA0A1W2PQU2 76 aa17.3■□□□□ 0.36
ERBB2-209ENST00000578709 EIF3GO75821 320 aaKnown RBP eCLIP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms