RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ZNF345Q14585 488 aa19.21■□□□□ 0.67
NME3-209ENST00000566600 TMEM41BQ5BJD5 291 aa19.21■□□□□ 0.67
NME3-209ENST00000566600 MIR17HGQ75NE6 70 aa19.21■□□□□ 0.67
NME3-209ENST00000566600 GNPNAT1Q96EK6 184 aaPredicted RBP19.21■□□□□ 0.67
NME3-209ENST00000566600 C20orf173Q96LM9 149 aa19.21■□□□□ 0.67
NME3-209ENST00000566600 CLEC5AQ9NY25 188 aa19.21■□□□□ 0.67
NME3-209ENST00000566600 M6PRP20645 277 aa19.2■□□□□ 0.66
NME3-209ENST00000566600 NUTF2P61970 127 aaKnown RBP19.2■□□□□ 0.66
NME3-209ENST00000566600 RPL7L1Q6DKI1 246 aaKnown RBP19.2■□□□□ 0.66
NME3-209ENST00000566600 OR2G3Q8NGZ4 309 aa19.2■□□□□ 0.66
NME3-209ENST00000566600 SLC25A2Q9BXI2 301 aa19.2■□□□□ 0.66
NME3-209ENST00000566600 ZNF331Q9NQX6 463 aaPredicted RBP19.2■□□□□ 0.66
NME3-209ENST00000566600 H3BQ15 152 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 JTBO76095 146 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 CA1P00915 261 aaPredicted RBP19.19■□□□□ 0.66
NME3-209ENST00000566600 HIST1H1EP10412 219 aaKnown RBP19.19■□□□□ 0.66
NME3-209ENST00000566600 ATP6V0CP27449 155 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 SERF2P84101 59 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 IGFL4Q6B9Z1 124 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 RNF182Q8N6D2 247 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 ST6GAL2Q96JF0 529 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 CLUHP3Q96NS8 147 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 RETNQ9HD89 108 aa19.19■□□□□ 0.66
NME3-209ENST00000566600 SPRY2O43597 315 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 ZNF253O75346 499 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 TAS2R45P59539 299 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 PSG3Q16557 428 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 DEFB135Q30KP9 77 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 ZNF738Q8NE65 137 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 FAM167A-AS1Q96KT0 104 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 RFNGQ9Y644 331 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 TENM3Q9P273 2699 aa19.18■□□□□ 0.66
NME3-209ENST00000566600 STAB2Q8WWQ8 2551 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 AGRNO00468 2067 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 A0A0D9SG52 128 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 A0A0J9YX75 114 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 MBP02144 154 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 SNRPCP09234 159 aaKnown RBP19.17■□□□□ 0.66
NME3-209ENST00000566600 PDE6HQ13956 83 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 GDF5OSQ5U4N7 250 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 TCTE3Q8IZS6 198 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 KCNRGQ8N5I3 272 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 OR11H4Q8NGC9 324 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 RNF183Q96D59 192 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 SAT2Q96F10 170 aaPredicted RBP19.17■□□□□ 0.66
NME3-209ENST00000566600 OVOL2Q9BRP0 275 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 OR51M1Q9H341 326 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 ZNF586Q9NXT0 402 aa19.17■□□□□ 0.66
NME3-209ENST00000566600 TRBV19A0A075B6N1 114 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 A0A1W2PPV4 95 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 H3BTX0 84 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 PYYP10082 97 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 DEFB1P60022 68 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 KHDC3LQ587J8 217 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 ARPC5LQ9BPX5 153 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 PAXXQ9BUH6 204 aa19.16■□□□□ 0.66
NME3-209ENST00000566600 hCG_2014768A0A024R1R8 64 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 SLC17A3O00476 420 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 DUSP14O95147 198 aaKnown RBP19.15■□□□□ 0.66
NME3-209ENST00000566600 PSG9Q00887 426 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 OR4B1Q8NGF8 309 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 OR10G4Q8NGN3 311 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 OR10G9Q8NGN4 311 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 OR10G7Q8NGN6 311 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 C1QTNF4Q9BXJ3 329 aa19.15■□□□□ 0.66
NME3-209ENST00000566600 F6UB75 175 aa19.14■□□□□ 0.65
NME3-209ENST00000566600 OR7C2O60412 319 aa19.14■□□□□ 0.65
NME3-209ENST00000566600 RAB2AP61019 212 aa19.14■□□□□ 0.65
NME3-209ENST00000566600 WWC2-AS2Q96NR7 200 aa19.14■□□□□ 0.65
NME3-209ENST00000566600 NBEAP1P0C6P0 100 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 HLA-DMBP28068 263 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 AKAP14Q86UN6 197 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 RNF141Q8WVD5 230 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 RPUSD4Q96CM3 377 aaKnown RBP19.13■□□□□ 0.65
NME3-209ENST00000566600 SH3BGRL3Q9H299 93 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 CYTL1Q9NRR1 136 aa19.13■□□□□ 0.65
NME3-209ENST00000566600 IGKV3-20P01619 116 aa19.12■□□□□ 0.65
NME3-209ENST00000566600 FAM122CQ6P4D5 195 aa19.12■□□□□ 0.65
NME3-209ENST00000566600 BLNKQ8WV28 456 aa19.12■□□□□ 0.65
NME3-209ENST00000566600 KANTRA0A1W2PQU2 76 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 GIG44P09565 113 aaPredicted RBP19.11■□□□□ 0.65
NME3-209ENST00000566600 C4BPBP20851 252 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 OR8A1Q8NGG7 326 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 FXYD5Q96DB9 178 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 AAMDCQ9H7C9 122 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 PRELID1Q9Y255 219 aa19.11■□□□□ 0.65
NME3-209ENST00000566600 OR10J4P0C629 311 aa19.1■□□□□ 0.65
NME3-209ENST00000566600 CDC34P49427 236 aaPredicted RBP19.1■□□□□ 0.65
NME3-209ENST00000566600 PQLC2Q6ZP29 291 aa19.1■□□□□ 0.65
NME3-209ENST00000566600 MRPL53Q96EL3 112 aaKnown RBP19.1■□□□□ 0.65
NME3-209ENST00000566600 HUWE1Q7Z6Z7 4374 aaKnown RBP19.09■□□□□ 0.65
NME3-209ENST00000566600 A8MTW9 85 aa19.09■□□□□ 0.65
NME3-209ENST00000566600 BCL2L11O43521 198 aa19.09■□□□□ 0.65
NME3-209ENST00000566600 NDUFB4O95168 129 aa19.09■□□□□ 0.65
NME3-209ENST00000566600 CNN1P51911 297 aaKnown RBP19.09■□□□□ 0.65
NME3-209ENST00000566600 UBE2L3P68036 154 aaKnown RBP19.09■□□□□ 0.65
NME3-209ENST00000566600 RPP25LQ8N5L8 163 aaKnown RBP19.09■□□□□ 0.65
NME3-209ENST00000566600 PFDN1O60925 122 aa19.08■□□□□ 0.64
NME3-209ENST00000566600 C1QBP02746 253 aa19.08■□□□□ 0.64
NME3-209ENST00000566600 HIST1H1AQ02539 215 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms