RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 DOK5Q9P104 306 aa12.94□□□□□ -0.34
E4F1-203ENST00000563643 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
E4F1-203ENST00000563643 MPC2O95563 127 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 RAP2BP61225 183 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 RAB31Q13636 194 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 S100A7AQ86SG5 101 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 SHANK2-AS3Q9BTD1 123 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 VPS13BQ7Z7G8 4022 aa12.93□□□□□ -0.34
E4F1-203ENST00000563643 H3BRN7 92 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 CXCL3P19876 107 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 GALR1P47211 349 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 CAMLGP49069 296 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
E4F1-203ENST00000563643 NHLH2Q02577 135 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 BAXQ07812 192 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 GPR82Q96P67 336 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 SLC25A39Q9BZJ4 359 aaPredicted RBP12.92□□□□□ -0.34
E4F1-203ENST00000563643 ARL6Q9H0F7 186 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 MED28Q9H204 178 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 SLC25A32Q9H2D1 315 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
E4F1-203ENST00000563643 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 OR5G3P0C626 314 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 RNF212Q495C1 297 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 PSMG4Q5JS54 123 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 CHAC2Q8WUX2 184 aa12.91□□□□□ -0.34
E4F1-203ENST00000563643 ZNF705EA8MWA4 302 aaPredicted RBP12.9□□□□□ -0.34
E4F1-203ENST00000563643 SOCS3O14543 225 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 MEOX2P50222 304 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 OXA1LQ15070 435 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 FCN2Q15485 313 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 PATE2Q6UY27 113 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 RNF24Q9Y225 148 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 X6R8D5 127 aa12.9□□□□□ -0.34
E4F1-203ENST00000563643 MPDU1O75352 247 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 FGF7P21781 194 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 ID1P41134 155 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 PSMB3P49720 205 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 OPCMLQ14982 345 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 STHQ8IWL8 128 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 ARV1Q9H2C2 271 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
E4F1-203ENST00000563643 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 ISLRO14498 428 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 COX7A2P2O60397 106 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
E4F1-203ENST00000563643 RPL29P47914 159 aaKnown RBP12.88□□□□□ -0.35
E4F1-203ENST00000563643 MIC13Q5XKP0 118 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 TRPT1Q86TN4 253 aaKnown RBP12.88□□□□□ -0.35
E4F1-203ENST00000563643 C6orf223Q8N319 242 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 RSG1Q9BU20 258 aa12.88□□□□□ -0.35
E4F1-203ENST00000563643 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
E4F1-203ENST00000563643 CLINT1Q14677 625 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 Q6ZRG5 221 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 LINC00305Q7Z4B0 112 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 C17orf77Q96MU5 243 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 HSPB11Q9Y547 144 aa12.87□□□□□ -0.35
E4F1-203ENST00000563643 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
E4F1-203ENST00000563643 B2MP61769 119 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 Q5VSD8 79 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 THAP6Q8TBB0 222 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 DNAJC4Q9NNZ3 241 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 PXMP4Q9Y6I8 212 aa12.86□□□□□ -0.35
E4F1-203ENST00000563643 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 GIPP09681 153 aaPredicted RBP12.85□□□□□ -0.35
E4F1-203ENST00000563643 TMEM41BQ5BJD5 291 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
E4F1-203ENST00000563643 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 PFDN5Q99471 154 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 ATP5SQ99766 215 aa12.85□□□□□ -0.35
E4F1-203ENST00000563643 AGRNO00468 2067 aa12.84□□□□□ -0.35
E4F1-203ENST00000563643 A0A087X0K7 114 aa12.84□□□□□ -0.35
E4F1-203ENST00000563643 SPP1P10451 314 aa12.84□□□□□ -0.35
E4F1-203ENST00000563643 FAM210BQ96KR6 192 aa12.84□□□□□ -0.35
E4F1-203ENST00000563643 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
E4F1-203ENST00000563643 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
E4F1-203ENST00000563643 H3BMM0 161 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.36
E4F1-203ENST00000563643 HLA-DRB4P13762 266 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 C4BPBP20851 252 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 KRTAP10-2P60368 255 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 FGL1Q08830 312 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 KCNIP2Q9NS61 270 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 HLA-DRB4X5D2U9 266 aa12.83□□□□□ -0.36
E4F1-203ENST00000563643 J3QL48 77 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms