RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 Q8NAQ8 132 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 OR1L4Q8NGR5 311 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 MED28Q9H204 178 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 X6R8D5 127 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 RPL12P30050 165 aaKnown RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 PMS2P11Q13670 270 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 RGS21Q2M5E4 152 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 BPIFA4PQ86YQ2 179 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 CLUHP3Q96NS8 147 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 PFDN5Q99471 154 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 ATP5SQ99766 215 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 SMIM3Q9BZL3 60 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 WDR61Q9GZS3 305 aaKnown RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 RNF24Q9Y225 148 aa11.15□□□□□ -0.62
CCNDBP1-203ENST00000562553 ALMS1Q8TCU4 4167 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 IGHV4-28A0A0C4DH34 117 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 A8MTW9 85 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 H3BQ15 152 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 SLC17A3O00476 420 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 IGLC2P0DOY2 106 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
CCNDBP1-203ENST00000562553 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 CXCL2P19875 107 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 CNN1P51911 297 aaKnown RBP11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 PSG9Q00887 426 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 OXA1LQ15070 435 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 PSG3Q16557 428 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 LRRC20Q8TCA0 184 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 WFDC1Q9HC57 220 aa11.13□□□□□ -0.63
CCNDBP1-203ENST00000562553 CXorf65A6NEN9 183 aa11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 Q5BKY6 102 aa11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 SLC50A1Q9BRV3 221 aa11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 HYDINQ4G0P3 5121 aa11.12□□□□□ -0.63
CCNDBP1-203ENST00000562553 MIFP14174 115 aa11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 NANOS2P60321 138 aaKnown RBP11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 OR8A1Q8NGG7 326 aa11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 SLC25A2Q9BXI2 301 aa11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
CCNDBP1-203ENST00000562553 EPPK1P58107 5090 aaKnown RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 GIPP09681 153 aaPredicted RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 PYYP10082 97 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 C11orf45Q8TAV5 145 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 FAM167A-AS1Q96KT0 104 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 KCNIP2Q9NS61 270 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
CCNDBP1-203ENST00000562553 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 C17orf112F2Z3M2 114 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 M0R2Z0 102 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 IFNA5P01569 189 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 C1orf158Q8N1D5 194 aa11.09□□□□□ -0.63
CCNDBP1-203ENST00000562553 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 SCGB1C1Q8TD33 95 aa11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 PARD6GQ9BYG4 376 aaPredicted RBP11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
CCNDBP1-203ENST00000562553 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 NUPR2A6NF83 97 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 BOLA2-SMG1P6H3BVE0 249 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 NDUFB4O95168 129 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 HIST1H1EP10412 219 aaKnown RBP11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 GUK1Q16774 197 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 AQP10Q96PS8 301 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 NEU1Q99519 415 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 MRPL32Q9BYC8 188 aaKnown RBP11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 FUT9Q9Y231 359 aa11.07□□□□□ -0.64
CCNDBP1-203ENST00000562553 TRAV12-2A0A075B6T6 113 aa11.06□□□□□ -0.64
CCNDBP1-203ENST00000562553 ZNF253O75346 499 aa11.06□□□□□ -0.64
CCNDBP1-203ENST00000562553 EIF3GO75821 320 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCNDBP1-203ENST00000562553 RHOBP62745 196 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms