RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
USP3-205ENST00000557884 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
USP3-205ENST00000557884 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
USP3-205ENST00000557884 BORCS7-ASMTA0A0B4J1R7 106 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
USP3-205ENST00000557884 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 ACOT6Q3I5F7 207 aaPredicted RBP10.54□□□□□ -0.72
USP3-205ENST00000557884 LCN15Q6UWW0 184 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
USP3-205ENST00000557884 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 HRH4Q9H3N8 390 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 DNAH7Q8WXX0 4024 aa10.54□□□□□ -0.72
USP3-205ENST00000557884 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 H3BMM0 161 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 HLA-DRB4P13762 266 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 CXCL2P19875 107 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 M6PRP20645 277 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 RHOBP62745 196 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 KCNRGQ8N5I3 272 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 SAV1Q9H4B6 383 aaPredicted RBP10.53□□□□□ -0.72
USP3-205ENST00000557884 CYTL1Q9NRR1 136 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 HLA-DRB4X5D2U9 266 aa10.53□□□□□ -0.72
USP3-205ENST00000557884 UBE2CO00762 179 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 TAAR5O14804 337 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR7C2O60412 319 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
USP3-205ENST00000557884 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
USP3-205ENST00000557884 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
USP3-205ENST00000557884 ZNF345Q14585 488 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 AKAP14Q86UN6 197 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR4B1Q8NGF8 309 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR10G9Q8NGN4 311 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR10G7Q8NGN6 311 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 OR2G3Q8NGZ4 309 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 ARPC5LQ9BPX5 153 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 PSMG3Q9BT73 122 aaPredicted RBP10.52□□□□□ -0.73
USP3-205ENST00000557884 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
USP3-205ENST00000557884 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
USP3-205ENST00000557884 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 A0A0J9YX75 114 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
USP3-205ENST00000557884 OR10J4P0C629 311 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 C4BPBP20851 252 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 FXYD7P58549 80 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 PSG3Q16557 428 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 GUK1Q16774 197 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 GNPNAT1Q96EK6 184 aaPredicted RBP10.51□□□□□ -0.73
USP3-205ENST00000557884 SAT2Q96F10 170 aaPredicted RBP10.51□□□□□ -0.73
USP3-205ENST00000557884 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
USP3-205ENST00000557884 A0A0D9SG52 128 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
USP3-205ENST00000557884 BCL2L11O43521 198 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 SPRY2O43597 315 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 JTBO76095 146 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
USP3-205ENST00000557884 SPP1P10451 314 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 CD300CQ08708 224 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
USP3-205ENST00000557884 Q6ZWC4 215 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 TMUB2Q71RG4 321 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
USP3-205ENST00000557884 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
USP3-205ENST00000557884 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 PFDN1O60925 122 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 NDUFB4O95168 129 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 TAS2R45P59539 299 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 UBE2L3P68036 154 aaKnown RBP10.49□□□□□ -0.73
USP3-205ENST00000557884 SERF2P84101 59 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
USP3-205ENST00000557884 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
USP3-205ENST00000557884 RNF183Q96D59 192 aa10.49□□□□□ -0.73
USP3-205ENST00000557884 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
USP3-205ENST00000557884 MBP02144 154 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 C1QBP02746 253 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms