RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CXCL3P19876 107 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 S100A11P31949 105 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 CNN1P51911 297 aaKnown RBP5.83□□□□□ -1.48
VTI1B-206ENST00000556461 BAXQ07812 192 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 SAMD13Q5VXD3 122 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 EBLN2Q6P2I7 272 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 Q6ZTC4 211 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 C1orf158Q8N1D5 194 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 OR11H7Q8NGC8 314 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 NMES1Q9C002 83 aa5.83□□□□□ -1.48
VTI1B-206ENST00000556461 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 H3BQ15 152 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 M0R2Z0 102 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 CRXO43186 299 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-206ENST00000556461 LY6G6CO95867 125 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 FGF7P21781 194 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 S100A7P31151 101 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 DEFA1P59665 94 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 DEFA3P59666 94 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 NUTF2P61970 127 aaKnown RBP5.82□□□□□ -1.48
VTI1B-206ENST00000556461 SPINK13Q1W4C9 94 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 GCSAMLQ5JQS6 135 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 PXDC1Q5TGL8 231 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 C10orf113Q5VZT2 155 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 SPATA31B1PQ5VZV4 182 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 STX12Q86Y82 276 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 ZNF738Q8NE65 137 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 THAP6Q8TBB0 222 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 RNF126Q9BV68 326 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 C1QTNF4Q9BXJ3 329 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 MFFQ9GZY8 342 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 HRH4Q9H3N8 390 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 DNAJC4Q9NNZ3 241 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 SLC39A9Q9NUM3 307 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 PLA2G2EQ9NZK7 142 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 KLK5Q9Y337 293 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-206ENST00000556461 PXMP4Q9Y6I8 212 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 DNAH17Q9UFH2 4485 aa5.82□□□□□ -1.48
VTI1B-206ENST00000556461 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 TRAV12-2A0A075B6T6 113 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 E5RGE8 158 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 SSNA1O43805 119 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 IGLC2P0DOY2 106 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 RPL29P47914 159 aaKnown RBP5.81□□□□□ -1.48
VTI1B-206ENST00000556461 EMP1P54849 157 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 B2MP61769 119 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 HIST1H1AQ02539 215 aaPredicted RBP5.81□□□□□ -1.48
VTI1B-206ENST00000556461 CLINT1Q14677 625 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 PSG3Q16557 428 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 OR8A1Q8NGG7 326 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 OR5C1Q8NGR4 320 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 PPP1R1CQ8WVI7 109 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 SAT2Q96F10 170 aaPredicted RBP5.81□□□□□ -1.48
VTI1B-206ENST00000556461 NEU1Q99519 415 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 NPCDR1Q9BY65 106 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 ZNF331Q9NQX6 463 aaPredicted RBP5.81□□□□□ -1.48
VTI1B-206ENST00000556461 ALG5Q9Y673 324 aa5.81□□□□□ -1.48
VTI1B-206ENST00000556461 DUSP14O95147 198 aaKnown RBP5.8□□□□□ -1.48
VTI1B-206ENST00000556461 MPC2O95563 127 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 RLN2P04090 185 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 HBG1P69891 147 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 HBG2P69892 147 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 RAB31Q13636 194 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 KIR3DS1Q14943 382 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 ATP6V1FQ16864 119 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 LCN15Q6UWW0 184 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 Q6ZRG5 221 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 BPIFA4PQ86YQ2 179 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 BAP18Q8IXM2 172 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 LRRC20Q8TCA0 184 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 CHAC2Q8WUX2 184 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 RPUSD4Q96CM3 377 aaKnown RBP5.8□□□□□ -1.48
VTI1B-206ENST00000556461 IGF2BP2-AS1Q96M15 143 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 PARD6GQ9BYG4 376 aaPredicted RBP5.8□□□□□ -1.48
VTI1B-206ENST00000556461 ZNF586Q9NXT0 402 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 APLNQ9ULZ1 77 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 GOLT1BQ9Y3E0 138 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 RFNGQ9Y644 331 aa5.8□□□□□ -1.48
VTI1B-206ENST00000556461 SMIM9A6NGZ8 99 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 ZNF705GA8MUZ8 300 aaPredicted RBP5.79□□□□□ -1.48
VTI1B-206ENST00000556461 IGLL5B9A064 214 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 BOLA2-SMG1P6H3BVE0 249 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 PYYP10082 97 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 CXCL2P19875 107 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 CYCSP99999 105 aaKnown RBP5.79□□□□□ -1.48
VTI1B-206ENST00000556461 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 S100A7AQ86SG5 101 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 RPP25LQ8N5L8 163 aaKnown RBP5.79□□□□□ -1.48
VTI1B-206ENST00000556461 C2CD4CQ8TF44 421 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 FAM167A-AS1Q96KT0 104 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 PFDN5Q99471 154 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 SLC50A1Q9BRV3 221 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 SLC25A31Q9H0C2 315 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 WFDC1Q9HC57 220 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 MBD2Q9UBB5 411 aa5.79□□□□□ -1.48
VTI1B-206ENST00000556461 HECTD4Q9Y4D8 3996 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 DEFB131BA0A096LNP1 70 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 TRAV10A0A0B4J240 114 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms