RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 DEFB4AO15263 64 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 CXCL2P19875 107 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 HLA-DMBP28068 263 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 OXA1LQ15070 435 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 CLUHP3Q96NS8 147 aa11.04□□□□□ -0.64
ACTN1-217ENST00000556203 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-217ENST00000556203 H3BTX0 84 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 PSG9Q00887 426 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
ACTN1-217ENST00000556203 KCNIP2Q9NS61 270 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 X6R8D5 127 aa11.03□□□□□ -0.64
ACTN1-217ENST00000556203 C17orf112F2Z3M2 114 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 H3BQ15 152 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 SLC17A3O00476 420 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 IFNA5P01569 189 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-217ENST00000556203 CNN1P51911 297 aaKnown RBP11.02□□□□□ -0.65
ACTN1-217ENST00000556203 PMS2P11Q13670 270 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 PSG3Q16557 428 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 Q8NAQ8 132 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 HRH4Q9H3N8 390 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-217ENST00000556203 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.65
ACTN1-217ENST00000556203 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
ACTN1-217ENST00000556203 CXorf65A6NEN9 183 aa11.01□□□□□ -0.65
ACTN1-217ENST00000556203 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
ACTN1-217ENST00000556203 GIPP09681 153 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-217ENST00000556203 PRB4P10163 310 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-217ENST00000556203 MIFP14174 115 aa11.01□□□□□ -0.65
ACTN1-217ENST00000556203 SCGB1C1Q8TD33 95 aa11.01□□□□□ -0.65
ACTN1-217ENST00000556203 WFDC1Q9HC57 220 aa11.01□□□□□ -0.65
ACTN1-217ENST00000556203 A8MTW9 85 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 HIST1H1AQ02539 215 aaPredicted RBP11□□□□□ -0.65
ACTN1-217ENST00000556203 GUK1Q16774 197 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 Q5BKY6 102 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 AMTNQ6UX39 209 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 OR8A1Q8NGG7 326 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 ASB13Q8WXK3 278 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
ACTN1-217ENST00000556203 SLC25A2Q9BXI2 301 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
ACTN1-217ENST00000556203 RBMY1A1P0DJD3 496 aaKnown RBP10.99□□□□□ -0.65
ACTN1-217ENST00000556203 RBMY1CP0DJD4 496 aa10.99□□□□□ -0.65
ACTN1-217ENST00000556203 RBMY1FQ15415 496 aaKnown RBP10.99□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-217ENST00000556203 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
ACTN1-217ENST00000556203 SAT2Q96F10 170 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-217ENST00000556203 PARD6GQ9BYG4 376 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-217ENST00000556203 IGHV3OR16-12A0A075B7B8 117 aa10.98□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF705FA8MVS1 300 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-217ENST00000556203 PYYP10082 97 aa10.98□□□□□ -0.65
ACTN1-217ENST00000556203 HIST1H1EP10412 219 aaKnown RBP10.98□□□□□ -0.65
ACTN1-217ENST00000556203 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
ACTN1-217ENST00000556203 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
ACTN1-217ENST00000556203 AQP10Q96PS8 301 aa10.98□□□□□ -0.65
ACTN1-217ENST00000556203 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
ACTN1-217ENST00000556203 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 NUPR2A6NF83 97 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 M0R2Z0 102 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 ZNF253O75346 499 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 RHOBP62745 196 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 SPINK13Q1W4C9 94 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
ACTN1-217ENST00000556203 FXYD6-FXYD2A0A087WZ82 144 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 PRAC2D3DTV9 90 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 AMBPP02760 352 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 CEMP1Q6PRD7 247 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-217ENST00000556203 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 OR2T35Q8NGX2 323 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 NEU1Q99519 415 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
ACTN1-217ENST00000556203 SMIM9A6NGZ8 99 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 CRXO43186 299 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-217ENST00000556203 NDUFB4O95168 129 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 ZNF266Q14584 549 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 BAP18Q8IXM2 172 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 OR10J6PQ8NGY7 276 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-217ENST00000556203 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
ACTN1-217ENST00000556203 RYR3Q15413 4870 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 TRAV12-2A0A075B6T6 113 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 LCE6AA0A183 80 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms