RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 TNS1Q9HBL0 1735 aaKnown RBP14.22□□□□□ -0.13
SYNE3-204ENST00000555759 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 TMEM213A2RRL7 107 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 PINLYPA6NC86 204 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 LMO1P25800 156 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 TMEM200BQ69YZ2 307 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 C17orf82Q86X59 251 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-204ENST00000555759 H3BMG7 143 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 LINC00158P58513 81 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 UTF1Q5T230 341 aa14.21□□□□□ -0.13
SYNE3-204ENST00000555759 GAGE2AQ6NT46 116 aa14.21□□□□□ -0.14
SYNE3-204ENST00000555759 LY6G5BQ8NDX9 201 aa14.21□□□□□ -0.14
SYNE3-204ENST00000555759 OOSP1A8MZH6 123 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 PRSS57Q6UWY2 283 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 WIPF3A6NGB9 483 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 LEPROTO15243 131 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 MRPL51Q4U2R6 128 aaKnown RBP14.2□□□□□ -0.14
SYNE3-204ENST00000555759 SIGLEC9Q9Y336 463 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 A0A0U1RRA0 63 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 MLANAQ16655 118 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 C14orf178Q8N769 122 aaPredicted RBP14.2□□□□□ -0.14
SYNE3-204ENST00000555759 PHLDA1Q8WV24 401 aaPredicted RBP14.2□□□□□ -0.14
SYNE3-204ENST00000555759 SIGLEC8Q9NYZ4 499 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 SBF1O95248 1867 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 LINC00205P59089 165 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 GATD1Q8NB37 220 aa14.2□□□□□ -0.14
SYNE3-204ENST00000555759 VWC2Q2TAL6 325 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 LCNL1Q6ZST4 164 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 ADARB2-AS1A8MUL3 147 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 NPC2P61916 151 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 SLC25A16P16260 332 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 ITLN2Q8WWU7 325 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-204ENST00000555759 PRO1854Q9UHT4 67 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 ASXL3Q9C0F0 2248 aa14.19□□□□□ -0.14
SYNE3-204ENST00000555759 IGKV1D-17A0A075B6S4 117 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 PTPRDP23468 1912 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 FCN3O75636 299 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 C2orf66Q6UXQ4 117 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 C15orf32Q32M92 178 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 SPRR3Q9UBC9 169 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 PEMTQ9UBM1 199 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 IGHV3-11P01762 117 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 CFHR1Q03591 330 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 C12orf74Q32Q52 190 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 ZNF747Q9BV97 191 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 TRGV2A0A075B6R0 118 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 K7EN84 100 aa14.18□□□□□ -0.14
SYNE3-204ENST00000555759 EPOPA6NHQ4 379 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 TMEM14CQ9P0S9 112 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 TCF15Q12870 199 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 ZNF474Q6S9Z5 364 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-204ENST00000555759 GAFA1Q96PS6 74 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 HLA-DRB4P13762 266 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 PMVKQ15126 192 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 NDUFA4L2Q9NRX3 87 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 HLA-DRB4X5D2U9 266 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 LINC01560Q8TB33 94 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 SVILO95425 2214 aa14.17□□□□□ -0.14
SYNE3-204ENST00000555759 ESPL1Q14674 2120 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 TRBV19A0A075B6N1 114 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 F8VRH5 84 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 WNT2P09544 360 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 HLA-DMBP28068 263 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 Q6ZVH6 145 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 MDC1Q14676 2089 aaKnown RBP14.16□□□□□ -0.14
SYNE3-204ENST00000555759 MALP21145 153 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 B3GALT5-AS1P59052 145 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 TRBV7-1A0A0A6YYK4 115 aa14.16□□□□□ -0.14
SYNE3-204ENST00000555759 IGKV1-16P04430 117 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 ZFP36L1Q07352 338 aaKnown RBP14.15□□□□□ -0.14
SYNE3-204ENST00000555759 IGHV3OR16-10A0A075B7F0 116 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 FGF6P10767 208 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 PAX4O43316 350 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 TRACP01848 142 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 C5orf64Q2M2E5 130 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 AHCTF1Q8WYP5 2266 aa14.15□□□□□ -0.14
SYNE3-204ENST00000555759 SRRM4A7MD48 611 aaKnown RBP14.14□□□□□ -0.15
SYNE3-204ENST00000555759 RNASE6Q93091 150 aaKnown RBP14.14□□□□□ -0.15
SYNE3-204ENST00000555759 MRPL35Q9NZE8 188 aaKnown RBP14.14□□□□□ -0.15
SYNE3-204ENST00000555759 A0A1W2PPI3 338 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 IGLV3-1P01715 115 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 CD24P25063 80 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRR20EP86478 221 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRR20CP86479 221 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRR20DP86480 221 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRR20BP86481 221 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 PRR20AP86496 221 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 K7ERJ3 54 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 NDUFS7O75251 213 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 MINOS1Q5TGZ0 78 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 MINOS1-NBL1R4GNA1 71 aa14.14□□□□□ -0.15
SYNE3-204ENST00000555759 DOCK11Q5JSL3 2073 aa14.13□□□□□ -0.15
SYNE3-204ENST00000555759 TEX48A0A1B0GUV7 120 aa14.13□□□□□ -0.15
SYNE3-204ENST00000555759 ZSWIM8A7E2V4 1837 aa14.13□□□□□ -0.15
SYNE3-204ENST00000555759 TMEM178BH3BS89 294 aa14.13□□□□□ -0.15
SYNE3-204ENST00000555759 PRB4P10163 310 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms