RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 KNCNA6PVL3 124 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 A8MZ25 164 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 ISLRO14498 428 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
BRF1-217ENST00000550375 MBP02144 154 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
BRF1-217ENST00000550375 DEFB1P60022 68 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 TMEM41BQ5BJD5 291 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 C9orf62Q8N4C0 152 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 C20orf173Q96LM9 149 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 ASCL2Q99929 193 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 OR51M1Q9H341 326 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
BRF1-217ENST00000550375 OR7C2O60412 319 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 OR10J4P0C629 311 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 SPP1P10451 314 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 RPL35AP18077 110 aaKnown RBP12.74□□□□□ -0.37
BRF1-217ENST00000550375 NKX2-5P52952 324 aaPredicted RBP12.74□□□□□ -0.37
BRF1-217ENST00000550375 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 RPP25LQ8N5L8 163 aaKnown RBP12.74□□□□□ -0.37
BRF1-217ENST00000550375 BLNKQ8WV28 456 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 PAXXQ9BUH6 204 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 HRH4Q9H3N8 390 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 RPRMQ9NS64 109 aa12.74□□□□□ -0.37
BRF1-217ENST00000550375 SLC17A3O00476 420 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 HIST1H1EP10412 219 aaKnown RBP12.73□□□□□ -0.37
BRF1-217ENST00000550375 HLA-DMBP28068 263 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 CDC34P49427 236 aaPredicted RBP12.73□□□□□ -0.37
BRF1-217ENST00000550375 TAS2R45P59539 299 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
BRF1-217ENST00000550375 KHDC3LQ587J8 217 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 AKR1C8PQ5T2L2 129 aa12.73□□□□□ -0.37
BRF1-217ENST00000550375 LOC102724200A0A096LPH7 203 aaPredicted RBP12.72□□□□□ -0.37
BRF1-217ENST00000550375 PRB4P10163 310 aaPredicted RBP12.72□□□□□ -0.37
BRF1-217ENST00000550375 TPT1P13693 172 aaKnown RBP12.72□□□□□ -0.37
BRF1-217ENST00000550375 GUK1Q16774 197 aa12.72□□□□□ -0.37
BRF1-217ENST00000550375 BAP18Q8IXM2 172 aa12.72□□□□□ -0.37
BRF1-217ENST00000550375 RNF141Q8WVD5 230 aa12.72□□□□□ -0.37
BRF1-217ENST00000550375 ZNF503Q96F45 646 aa12.72□□□□□ -0.37
BRF1-217ENST00000550375 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
BRF1-217ENST00000550375 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
BRF1-217ENST00000550375 ZNF331Q9NQX6 463 aaPredicted RBP12.72□□□□□ -0.37
BRF1-217ENST00000550375 TRBV19A0A075B6N1 114 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.37
BRF1-217ENST00000550375 LINC00322Q6ZN03 302 aaPredicted RBP12.71□□□□□ -0.37
BRF1-217ENST00000550375 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 STHQ8IWL8 128 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 RAB24Q969Q5 203 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 FXYD5Q96DB9 178 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 SAT2Q96F10 170 aaPredicted RBP12.71□□□□□ -0.37
BRF1-217ENST00000550375 B9D2Q9BPU9 175 aa12.71□□□□□ -0.37
BRF1-217ENST00000550375 F6UB75 175 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 SEC11BP0C7V7 166 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 HAGHQ16775 308 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 GDF5OSQ5U4N7 250 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 SSX7Q7RTT5 188 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 ZNF738Q8NE65 137 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 STOML3Q8TAV4 291 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
BRF1-217ENST00000550375 NDUFB4O95168 129 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 C4BPBP20851 252 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 PSG3Q16557 428 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 PQLC2Q6ZP29 291 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 FOXI2Q6ZQN5 318 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 SLC51BQ86UW2 128 aa12.69□□□□□ -0.38
BRF1-217ENST00000550375 SAV1Q9H4B6 383 aaPredicted RBP12.69□□□□□ -0.38
BRF1-217ENST00000550375 CTXND1A0A1B0GTU2 59 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 ZNF705FA8MVS1 300 aaPredicted RBP12.68□□□□□ -0.38
BRF1-217ENST00000550375 ZNF253O75346 499 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 IGKV3-20P01619 116 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 ZNF705DP0CH99 300 aaPredicted RBP12.68□□□□□ -0.38
BRF1-217ENST00000550375 ZNF705BP0CI00 300 aaPredicted RBP12.68□□□□□ -0.38
BRF1-217ENST00000550375 FHITP49789 147 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 PSG9Q00887 426 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 PDE6HQ13956 83 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
BRF1-217ENST00000550375 EXOC3-AS1Q8N2X6 119 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
BRF1-217ENST00000550375 PHYHIPLQ96FC7 376 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
BRF1-217ENST00000550375 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 H3BMM0 161 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 APOC4P55056 127 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 RANP62826 216 aaKnown RBP12.67□□□□□ -0.38
BRF1-217ENST00000550375 IQCF2Q8IXL9 164 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
BRF1-217ENST00000550375 A0A0J9YX75 114 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms