RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
CUX1-213ENST00000549414 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
CUX1-213ENST00000549414 LHBP01229 141 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 FXYD7P58549 80 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 IGKV3OR2-268A0A0C4DH90 116 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 G3V318 75 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 LINC00614P0C842 121 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 TRAV8-6A0A0B4J262 113 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 FNDC10F2Z333 226 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 ASIPP42127 132 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 Q6AWC8 147 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 BEND2Q8NDZ0 799 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 NDUFAF3Q9BU61 184 aa13.06□□□□□ -0.32
CUX1-213ENST00000549414 OR1N2Q8NGR9 330 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 SLC50A1Q9BRV3 221 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 NDUFB8O95169 186 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 C12orf54Q6X4T0 127 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 SYT8Q8NBV8 401 aa13.05□□□□□ -0.32
CUX1-213ENST00000549414 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
CUX1-213ENST00000549414 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
CUX1-213ENST00000549414 HTN3P15516 51 aa13.04□□□□□ -0.32
CUX1-213ENST00000549414 NACAE9PAV3 2078 aa13.04□□□□□ -0.32
CUX1-213ENST00000549414 J3QKU1 62 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 C22orf34Q6ZV56 151 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 DMRTC2Q8IXT2 367 aaPredicted RBP13.03□□□□□ -0.32
CUX1-213ENST00000549414 FOXC2Q99958 501 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 UTF1Q5T230 341 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 CYB5R2Q6BCY4 276 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 MCRIP2Q9BUT9 160 aaKnown RBP13.03□□□□□ -0.32
CUX1-213ENST00000549414 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
CUX1-213ENST00000549414 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 H3BVH4 76 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 ATP6V0E1O15342 81 aa13.03□□□□□ -0.32
CUX1-213ENST00000549414 LINC00311Q8N616 119 aa13.02□□□□□ -0.32
CUX1-213ENST00000549414 LRP4O75096 1905 aa13.02□□□□□ -0.32
CUX1-213ENST00000549414 TMEM8BA6NDV4 472 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PRR20EP86478 221 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PRR20CP86479 221 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PRR20DP86480 221 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PRR20BP86481 221 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PRR20AP86496 221 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 J3QR89 54 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 TSPOP30536 169 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 POU2AF1Q16633 256 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 PSMB2P49721 201 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.33
CUX1-213ENST00000549414 Q5PR19 223 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 RITA1Q96K30 269 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 A6NNC1 897 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 CD7P09564 240 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 KIR2DL4Q99706 377 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 TOMM40O96008 361 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 KAAG1Q9UBP8 84 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
CUX1-213ENST00000549414 D6R8Y8 96 aa13□□□□□ -0.33
CUX1-213ENST00000549414 LEPP41159 167 aa13□□□□□ -0.33
CUX1-213ENST00000549414 Q86TA4 180 aa13□□□□□ -0.33
CUX1-213ENST00000549414 ZNF256Q9Y2P7 627 aaPredicted RBP13□□□□□ -0.33
CUX1-213ENST00000549414 A0A1B0GW15 77 aa13□□□□□ -0.33
CUX1-213ENST00000549414 H7C2G1 150 aa13□□□□□ -0.33
CUX1-213ENST00000549414 ERCC8Q13216 396 aa13□□□□□ -0.33
CUX1-213ENST00000549414 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
CUX1-213ENST00000549414 HIST1H4GQ99525 98 aa13□□□□□ -0.33
CUX1-213ENST00000549414 BEX4Q9NWD9 120 aaPredicted RBP13□□□□□ -0.33
CUX1-213ENST00000549414 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
CUX1-213ENST00000549414 SH2D1AO60880 128 aa13□□□□□ -0.33
CUX1-213ENST00000549414 PSG3Q16557 428 aa13□□□□□ -0.33
CUX1-213ENST00000549414 RNF182Q8N6D2 247 aa13□□□□□ -0.33
CUX1-213ENST00000549414 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
CUX1-213ENST00000549414 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 PROP1O75360 226 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 C3orf79P0CE67 100 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 DSCR9P59020 149 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
CUX1-213ENST00000549414 CACNG7P62955 275 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 AMMECR1LQ6DCA0 310 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 IGF2-ASQ6U949 168 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 CHD9Q3L8U1 2897 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 SMKR1H3BMG3 65 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 IGHV2-5P01817 119 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
CUX1-213ENST00000549414 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
CUX1-213ENST00000549414 LAMTOR2Q9Y2Q5 125 aa12.98□□□□□ -0.33
CUX1-213ENST00000549414 CRXO43186 299 aaPredicted RBP12.98□□□□□ -0.33
CUX1-213ENST00000549414 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms