RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 IGFL4Q6B9Z1 124 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 Q6ZRG5 221 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 C12orf45Q8N5I9 185 aaPredicted RBP6.68□□□□□ -1.34
YBX3-218ENST00000546298 RNF182Q8N6D2 247 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 OR8A1Q8NGG7 326 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 C2orf50Q96LR7 162 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 NUDT15Q9NV35 164 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
YBX3-218ENST00000546298 FAM240BA0A1B0GVZ2 78 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 M0R2Z0 102 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 CCSO14618 274 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 HTN3P15516 51 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 TSPOP30536 169 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 CAMLGP49069 296 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 ARL16Q0P5N6 197 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 C10orf113Q5VZT2 155 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 MZT2BQ6NZ67 158 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 PATE2Q6UY27 113 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 LINC00299Q6ZSB3 139 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 LINC00336Q6ZUF6 198 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 UBE2DNLQ8IWF7 75 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 TMEM256Q8N2U0 113 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 RPUSD4Q96CM3 377 aaKnown RBP6.67□□□□□ -1.34
YBX3-218ENST00000546298 LINC01587Q99440 93 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 SEC22CQ9BRL7 303 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 DNAJC4Q9NNZ3 241 aa6.67□□□□□ -1.34
YBX3-218ENST00000546298 ZNF705GA8MUZ8 300 aaPredicted RBP6.66□□□□□ -1.34
YBX3-218ENST00000546298 MRPS12O15235 138 aaKnown RBP6.66□□□□□ -1.34
YBX3-218ENST00000546298 CRXO43186 299 aaPredicted RBP6.66□□□□□ -1.34
YBX3-218ENST00000546298 S100A11P31949 105 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 HBG1P69891 147 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 HBG2P69892 147 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 S100ZQ8WXG8 99 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 MGST2Q99735 147 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
YBX3-218ENST00000546298 UQCC1Q9NVA1 299 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
YBX3-218ENST00000546298 CSMD3Q7Z407 3707 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 FAM24AA6NFZ4 105 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 CST7O76096 145 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 CDKN1BP46527 198 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 SULT1A1P50225 295 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 TAS2R60P59551 318 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 S100A10P60903 97 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 GUK1Q16774 197 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 ATP6V1FQ16864 119 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 RNF212Q495C1 297 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 ZNF493Q6ZR52 646 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 NRARPQ7Z6K4 114 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 STX12Q86Y82 276 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 BAP18Q8IXM2 172 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 OR10J6PQ8NGY7 276 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 TMEM37Q8WXS4 190 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 PFDN5Q99471 154 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 GPN1Q9HCN4 374 aaPredicted RBP6.65□□□□□ -1.34
YBX3-218ENST00000546298 LYRM2Q9NU23 88 aaPredicted RBP6.65□□□□□ -1.34
YBX3-218ENST00000546298 WDR83OSQ9Y284 106 aa6.65□□□□□ -1.34
YBX3-218ENST00000546298 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.35
YBX3-218ENST00000546298 TRAV12-2A0A075B6T6 113 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 H7BYZ3 331 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 DEFB130BP0DP73 79 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 DEFB130AP0DP74 79 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
YBX3-218ENST00000546298 FAM3BP58499 235 aaPredicted RBP6.64□□□□□ -1.35
YBX3-218ENST00000546298 IL15RAQ13261 267 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 OPCMLQ14982 345 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 VWC2Q2TAL6 325 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 LGALS9BQ3B8N2 356 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 TMEM252Q8N6L7 170 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 CHAC2Q8WUX2 184 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 C20orf144Q9BQM9 153 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
YBX3-218ENST00000546298 CBY3A6NI87 242 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 MPDU1O75352 247 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 RLN2P04090 185 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 ATP5G1P05496 136 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 IGLC2P0DOY2 106 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 HTN1P15515 57 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 ATP5G3P48201 142 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 BAXQ07812 192 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 ASAH1Q13510 395 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 RAB32Q13637 225 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 CCDC28AQ8IWP9 274 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 C16orf74Q96GX8 76 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 SLC39A9Q9NUM3 307 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 TIMM8BQ9Y5J9 83 aaPredicted RBP6.63□□□□□ -1.35
YBX3-218ENST00000546298 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
YBX3-218ENST00000546298 UBE2L5PA0A1B0GUS4 154 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 F5H768 121 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms