RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 L7N2F9 121 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 CNN1P51911 297 aaKnown RBP11.55□□□□□ -0.56
DDX55-212ENST00000544738 B2MP61769 119 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 VAMP2P63027 116 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 OXA1LQ15070 435 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 FAM222AQ5U5X8 452 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 RNF182Q8N6D2 247 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
DDX55-212ENST00000544738 CXCL3P19876 107 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 IGFL4Q6B9Z1 124 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 PATE2Q6UY27 113 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 OR11H7Q8NGC8 314 aa11.54□□□□□ -0.56
DDX55-212ENST00000544738 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
DDX55-212ENST00000544738 YTHDF2Q9Y5A9 579 aaKnown RBP11.54□□□□□ -0.56
DDX55-212ENST00000544738 IGLV2-18A0A075B6J9 118 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 FAM25EA8MYX2 175 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 CCSO14618 274 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 AGPAT2O15120 278 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 INSP01308 110 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 PSG3Q16557 428 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 CCDC32Q9BV29 185 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 NUDT15Q9NV35 164 aa11.53□□□□□ -0.56
DDX55-212ENST00000544738 TRAV6A0A075B6T7 132 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 C5orf51A6NDU8 294 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 C16orf90A8MZG2 172 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 M0R2Z0 102 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 CXCL2P19875 107 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 ARL16Q0P5N6 197 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 RAB31Q13636 194 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 C12orf45Q8N5I9 185 aaPredicted RBP11.52□□□□□ -0.57
DDX55-212ENST00000544738 PPP1R14DQ9NXH3 145 aa11.52□□□□□ -0.57
DDX55-212ENST00000544738 LSM5Q9Y4Y9 91 aaKnown RBP11.52□□□□□ -0.57
DDX55-212ENST00000544738 APOBP04114 4563 aaKnown RBP11.51□□□□□ -0.57
DDX55-212ENST00000544738 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
DDX55-212ENST00000544738 BCAP31P51572 246 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 CAV2P51636 162 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 DAD1P61803 113 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 RHOBP62745 196 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 LINC00299Q6ZSB3 139 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 C2orf50Q96LR7 162 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 SEC22CQ9BRL7 303 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
DDX55-212ENST00000544738 MRPS12O15235 138 aaKnown RBP11.5□□□□□ -0.57
DDX55-212ENST00000544738 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
DDX55-212ENST00000544738 H2AFB2P0C5Z0 115 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 TSPOP30536 169 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 HIST1H1AQ02539 215 aaPredicted RBP11.5□□□□□ -0.57
DDX55-212ENST00000544738 SOHLH1Q5JUK2 328 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 Q6ZRG5 221 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 Q8N1X5 172 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 TMEM256Q8N2U0 113 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 MGST2Q99735 147 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
DDX55-212ENST00000544738 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
DDX55-212ENST00000544738 FAM240BA0A1B0GVZ2 78 aa11.49□□□□□ -0.57
DDX55-212ENST00000544738 LYRM9A8MSI8 78 aa11.49□□□□□ -0.57
DDX55-212ENST00000544738 CAMLGP49069 296 aa11.49□□□□□ -0.57
DDX55-212ENST00000544738 MZT2BQ6NZ67 158 aa11.49□□□□□ -0.57
DDX55-212ENST00000544738 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
DDX55-212ENST00000544738 DNAJC4Q9NNZ3 241 aa11.49□□□□□ -0.57
DDX55-212ENST00000544738 ZNF331Q9NQX6 463 aaPredicted RBP11.49□□□□□ -0.57
DDX55-212ENST00000544738 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
DDX55-212ENST00000544738 CST7O76096 145 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 HTN3P15516 51 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 UQCC1Q9NVA1 299 aa11.48□□□□□ -0.57
DDX55-212ENST00000544738 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 S100A11P31949 105 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 CDKN1BP46527 198 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 SULT1A1P50225 295 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 HBG1P69891 147 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 HBG2P69892 147 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 LINC01587Q99440 93 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 LYRM2Q9NU23 88 aaPredicted RBP11.47□□□□□ -0.57
DDX55-212ENST00000544738 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 PXMP4Q9Y6I8 212 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
DDX55-212ENST00000544738 TAS2R60P59551 318 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 S100A10P60903 97 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 IL15RAQ13261 267 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 GUK1Q16774 197 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms