RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR11H7Q8NGC8 314 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 UFD1Q92890 307 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 GPR146Q96CH1 333 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 C20orf144Q9BQM9 153 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 CHAC1Q9BUX1 264 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 MND1Q9BWT6 205 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 ATG5Q9H1Y0 275 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 ENY2Q9NPA8 101 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
SNHG1-220ENST00000544550 TRGV2A0A075B6R0 118 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 TRAV34A0A0B4J273 112 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 TMEM235A6NFC5 223 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 IFITM5A6NNB3 132 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 PGLYRP1O75594 196 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 IGLV2-11P01706 119 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 SMIM18P0DKX4 95 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 RNASE2P10153 161 aaKnown RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 S100A7P31151 101 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 GALR1P47211 349 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 KRTAP10-6P60371 365 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 GNGT1P63211 74 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 MRPL23Q16540 153 aaKnown RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 LYPD5Q6UWN5 251 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 NEGR1Q7Z3B1 354 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 HSD17B11Q8NBQ5 300 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 CCDC197Q8NCU1 140 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 OR51G1Q8NGK1 321 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 OR52E5Q8NH55 327 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 TMEM37Q8WXS4 190 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 DPH3P1Q9H4G8 78 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 DNAJC4Q9NNZ3 241 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 DIABLOQ9NR28 239 aa2.7□□□□□ -1.98
SNHG1-220ENST00000544550 MRPL36Q9P0J6 103 aaKnown RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 ELF5Q9UKW6 265 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-220ENST00000544550 TRAV12-2A0A075B6T6 113 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 GPR31O00270 319 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ZNF324O75467 553 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-220ENST00000544550 CIB2O75838 187 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ATG12O94817 140 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 FABP1P07148 127 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 HSMCR30P0CW71 290 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ELK1P19419 428 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 HTR2BP41595 481 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 CDKN1BP46527 198 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 RND2P52198 227 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 RHOBP62745 196 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 DAZ2Q13117 558 aaKnown RBP2.69□□□□□ -1.98
SNHG1-220ENST00000544550 SPHARQ15513 63 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 LPCAT3Q6P1A2 487 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ZFP1Q6P2D0 407 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 PRSS54Q6PEW0 395 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 TMEM91Q6ZNR0 172 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 AHSA2Q719I0 299 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 HOGA1Q86XE5 327 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 OR8I2Q8N0Y5 310 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 THAP8Q8NA92 274 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 OCC1Q8TAD7 63 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 RNASEH2CQ8TDP1 164 aaKnown RBP2.69□□□□□ -1.98
SNHG1-220ENST00000544550 PPP1R14BQ96C90 147 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 SEC22AQ96IW7 307 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ST6GAL2Q96JF0 529 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 PBDC1Q9BVG4 233 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 ACOT13Q9NPJ3 140 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 CACNG5Q9UF02 275 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 PRO0255Q9UI72 69 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 RCL1Q9Y2P8 373 aaKnown RBP2.69□□□□□ -1.98
SNHG1-220ENST00000544550 RRP15Q9Y3B9 282 aaKnown RBP2.69□□□□□ -1.98
SNHG1-220ENST00000544550 LRP2P98164 4655 aa2.69□□□□□ -1.98
SNHG1-220ENST00000544550 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 SSX5O60225 188 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 FCER2P06734 321 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 MYL9P24844 172 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 SRIP30626 198 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 TAS2R20P59543 309 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 ZNF415Q09FC8 603 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 ARL16Q0P5N6 197 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 OR2F1Q13607 317 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PSG3Q16557 428 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 BSXQ3C1V8 233 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PHLDA2Q53GA4 152 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 C2orf83Q53S99 150 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 SPINK9Q5DT21 86 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 LELP1Q5T871 98 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 STEAP1BQ6NZ63 245 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 SMIM29Q86T20 159 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 WFDC10BQ8IUB3 73 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 FAM219AQ8IW50 185 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 C10orf67Q8IYJ2 551 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 ZNF738Q8NE65 137 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 ZNF680Q8NEM1 530 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 OR5AP2Q8NGF4 316 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 OR1B1Q8NGR6 318 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PCNPQ8WW12 178 aaKnown RBP2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PYDC1Q8WXC3 89 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 MRGPRFQ96AM1 343 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 GPR82Q96P67 336 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 ZNF2Q9BSG1 426 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PAXXQ9BUH6 204 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms