RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 EBLN2Q6P2I7 272 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 C22orf15Q8WYQ4 148 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 ZNF355PQ9NSJ1 428 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 MRPL27Q9P0M9 148 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 MRPS16Q9Y3D3 137 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 AVPP01185 164 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 TAS2R45P59539 299 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 Q8N6K4 173 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 FAM181BA6NEQ2 426 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 HSBP1O75506 76 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 LEMD1Q68G75 181 aa12.05□□□□□ -0.48
CLPTM1-202ENST00000541297 M0R2Z0 102 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 C8orf88P0DMB2 117 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 EBI3Q14213 229 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 UBE2V1Q13404 147 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 PRR31Q5SQ13 230 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 NUP35Q8NFH5 326 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 SSBP4Q9BWG4 385 aaPredicted RBP12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 ITPR2Q14571 2701 aa12.04□□□□□ -0.48
CLPTM1-202ENST00000541297 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 IGLL1P15814 213 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 NDPQ00604 133 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 WIPF2Q8TF74 440 aaPredicted RBP12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 MBD6Q96DN6 1003 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 TNFRSF19Q9NS68 423 aa12.03□□□□□ -0.48
CLPTM1-202ENST00000541297 TOMM40O96008 361 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 TGFAP01135 160 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 SPATA12Q7Z6I5 190 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 TMEM219Q86XT9 240 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 FAM167A-AS1Q96KT0 104 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 C19orf24Q9BVV8 132 aa12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.48
CLPTM1-202ENST00000541297 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 CAMPP49913 170 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 PRR27Q6MZM9 219 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 Q8N9W7 124 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 NUDT11Q96G61 164 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 Q96MF0 132 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 CCDC168Q8NDH2 2452 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 C2orf70A6NJV1 201 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 PYYP10082 97 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 UBE2G1P62253 170 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 KLF17Q5JT82 389 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 TP73-AS1Q9UF72 201 aa12.02□□□□□ -0.49
CLPTM1-202ENST00000541297 RASL11AQ6T310 242 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 ARPC1AQ92747 370 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 KLF5Q13887 457 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 GRAMD2BQ96HH9 432 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 CLEC5AQ9NY25 188 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 PDZD2O15018 2839 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 CREBBPQ92793 2442 aa12.01□□□□□ -0.49
CLPTM1-202ENST00000541297 PSMB11A5LHX3 300 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 CORTO00230 105 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 C1RLQ9NZP8 487 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 RASL11BQ9BPW5 248 aa12□□□□□ -0.49
CLPTM1-202ENST00000541297 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 ZNF329Q86UD4 541 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 IGHV7-81A0A0B4J1V7 117 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 URB1-AS1Q96HZ7 61 aa11.99□□□□□ -0.49
CLPTM1-202ENST00000541297 PEX7O00628 323 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 GATA3P23771 443 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 LY6EQ16553 131 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 ERASQ7Z444 233 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 PIFOQ8TCI5 191 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 SGK494Q96LW2 274 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 GSX1Q9H4S2 264 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 K7EP13 123 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 GNG5P63218 68 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 PVRIGQ6DKI7 326 aa11.98□□□□□ -0.49
CLPTM1-202ENST00000541297 PAXXQ9BUH6 204 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms