RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	DNAJC4	Q9NNZ3	241 aa		14.35	□□□□□ -0.11
RAP1B-222	ENST00000540781	SMIM9	A6NGZ8	99 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	ZNF705F	A8MVS1	300 aa	Predicted RBP	14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	C11orf94	C9JXX5	98 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	ZNF705D	P0CH99	300 aa	Predicted RBP	14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	ZNF705B	P0CI00	300 aa	Predicted RBP	14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	CXCL3	P19876	107 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	CNN1	P51911	297 aa	Known RBP	14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	CYCS	P99999	105 aa	Known RBP	14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	PSG3	Q16557	428 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	AMTN	Q6UX39	209 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	BPIFA4P	Q86YQ2	179 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	OR1L4	Q8NGR5	311 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	C2CD4C	Q8TF44	421 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781	GOLT1B	Q9Y3E0	138 aa		14.34	□□□□□ -0.11
RAP1B-222	ENST00000540781		E5RGE8	158 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	SSNA1	O43805	119 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	FGF7	P21781	194 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	RPL29	P47914	159 aa	Known RBP	14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	OPCML	Q14982	345 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	LRRC37A5P	Q49AS3	106 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	MORN5	Q5VZ52	161 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	OR11H7	Q8NGC8	314 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	SLC25A31	Q9H0C2	315 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	SLC39A9	Q9NUM3	307 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	OR5AC2	Q9NZP5	309 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	CELA1	Q9UNI1	258 aa		14.33	□□□□□ -0.12
RAP1B-222	ENST00000540781	AMBP	P02760	352 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	SNRPC	P09234	159 aa	Known RBP	14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	CXCL2	P19875	107 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	B2M	P61769	119 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	NHLH2	Q02577	135 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	LCN15	Q6UWW0	184 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781		Q6ZTC4	211 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	C1orf158	Q8N1D5	194 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	CHAC2	Q8WUX2	184 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	PFDN5	Q99471	154 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	SLC50A1	Q9BRV3	221 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	RFNG	Q9Y644	331 aa		14.32	□□□□□ -0.12
RAP1B-222	ENST00000540781	TRAV10	A0A0B4J240	114 aa		14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781		H0YIZ8	118 aa		14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781	HIST1H1A	Q02539	215 aa	Predicted RBP	14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781	OR8A1	Q8NGG7	326 aa		14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781	IGF2BP2-AS1	Q96M15	143 aa		14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781	PXMP4	Q9Y6I8	212 aa		14.31	□□□□□ -0.12
RAP1B-222	ENST00000540781	TRAV5	A0A0B4J249	113 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	TMEM189	A5PLL7	270 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781		H3BTX0	84 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	MPDU1	O75352	247 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	EMP1	P54849	157 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	H2BFS	P57053	126 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	RHOB	P62745	196 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	SPINK13	Q1W4C9	94 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	C12orf74	Q32Q52	190 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	ZNF767P	Q75MW2	155 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	OR5C1	Q8NGR4	320 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	RPUSD4	Q96CM3	377 aa	Known RBP	14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	TMEM208	Q9BTX3	173 aa		14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	ZNF331	Q9NQX6	463 aa	Predicted RBP	14.3	□□□□□ -0.12
RAP1B-222	ENST00000540781	IGLL5	B9A064	214 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781		M0R2Z0	102 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781	HBE1	P02100	147 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781	PPP1R1C	Q8WVI7	109 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781	PPP1R14D	Q9NXH3	145 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781	HYDIN	Q4G0P3	5121 aa		14.29	□□□□□ -0.12
RAP1B-222	ENST00000540781	INS	P01308	110 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	SPART-AS1	P0CW21	52 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	IGLC2	P0DOY2	106 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	PRB4	P10163	310 aa	Predicted RBP	14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	TCTA	P57738	103 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	THAP6	Q8TBB0	222 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781	NPCDR1	Q9BY65	106 aa		14.28	□□□□□ -0.12
RAP1B-222	ENST00000540781		H3BQ15	152 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	BOLA2-SMG1P6	H3BVE0	249 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	SLC17A3	O00476	420 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	CLINT1	Q14677	625 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	RRN3P1	Q2M238	152 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	LGALS9C	Q6DKI2	356 aa		14.27	□□□□□ -0.13
RAP1B-222	ENST00000540781	LOC102723971	A0A1B0GUV8	181 aa		14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	CRX	O43186	299 aa	Predicted RBP	14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	GUK1	Q16774	197 aa		14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	SAT2	Q96F10	170 aa	Predicted RBP	14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	RNF126	Q9BV68	326 aa		14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	APLN	Q9ULZ1	77 aa		14.26	□□□□□ -0.13
RAP1B-222	ENST00000540781	DEFB131B	A0A096LNP1	70 aa		14.25	□□□□□ -0.13
RAP1B-222	ENST00000540781	MPC2	O95563	127 aa		14.25	□□□□□ -0.13
RAP1B-222	ENST00000540781	BAP18	Q8IXM2	172 aa		14.25	□□□□□ -0.13
RAP1B-222	ENST00000540781	TRAV12-2	A0A075B6T6	113 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	TEX48	A0A1B0GUV7	120 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	PET100	P0DJ07	73 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	GCSAML	Q5JQS6	135 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	FAM222A	Q5U5X8	452 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	ZNF586	Q9NXT0	402 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	DKK2	Q9UBU2	259 aa		14.24	□□□□□ -0.13
RAP1B-222	ENST00000540781	IGHV4-4	A0A075B6R2	117 aa		14.23	□□□□□ -0.13
RAP1B-222	ENST00000540781	ZNF705G	A8MUZ8	300 aa	Predicted RBP	14.23	□□□□□ -0.13
RAP1B-222	ENST00000540781	PRAC2	D3DTV9	90 aa		14.23	□□□□□ -0.13
RAP1B-222	ENST00000540781	OR10J6P	Q8NGY7	276 aa		14.23	□□□□□ -0.13
RAP1B-222	ENST00000540781	WDR61	Q9GZS3	305 aa	Known RBP	14.23	□□□□□ -0.13
RAP1B-222	ENST00000540781	KCNIP2	Q9NS61	270 aa		14.23	□□□□□ -0.13

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