RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ZNF705BP0CI00 300 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 Q5BKY6 102 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 EBLN2Q6P2I7 272 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 ZNF709Q8N972 641 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 PFDN5Q99471 154 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 ATP5SQ99766 215 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 SLC35B3Q9H1N7 401 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 X6R8D5 127 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 SLC17A3O00476 420 aa13.27□□□□□ -0.29
SNRPA1-203ENST00000540017 IGLC2P0DOY2 106 aa13.27□□□□□ -0.29
SNRPA1-203ENST00000540017 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-203ENST00000540017 SPATA31B1PQ5VZV4 182 aa13.27□□□□□ -0.29
SNRPA1-203ENST00000540017 Q8NAQ8 132 aa13.27□□□□□ -0.29
SNRPA1-203ENST00000540017 RYR3Q15413 4870 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 A8MTW9 85 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF705EA8MWA4 302 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 PSG3Q16557 428 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF738Q8NE65 137 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 SAT2Q96F10 170 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 RFNGQ9Y644 331 aa13.26□□□□□ -0.29
SNRPA1-203ENST00000540017 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 PSG9Q00887 426 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 LCN15Q6UWW0 184 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 LRRC20Q8TCA0 184 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 C11orf68Q9H3H3 251 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
SNRPA1-203ENST00000540017 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 GIPP09681 153 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 CXCL2P19875 107 aa13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 DYNC2H1Q8NCM8 4307 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 TENM2Q9NT68 2774 aa13.24□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF705FA8MVS1 300 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 PMS2P11Q13670 270 aa13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 FAM167A-AS1Q96KT0 104 aa13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
SNRPA1-203ENST00000540017 PYYP10082 97 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 MIFP14174 115 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 ZNF705AQ6ZN79 300 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 OR8A1Q8NGG7 326 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 SLC25A2Q9BXI2 301 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 TMEM14CQ9P0S9 112 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 SACSQ9NZJ4 4579 aa13.22□□□□□ -0.29
SNRPA1-203ENST00000540017 PRAC2D3DTV9 90 aa13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 C17orf112F2Z3M2 114 aa13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 IFNA5P01569 189 aa13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 C1orf158Q8N1D5 194 aa13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-203ENST00000540017 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 CXorf65A6NEN9 183 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 M0R2Z0 102 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 NDUFB4O95168 129 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 NANOS2P60321 138 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 GUK1Q16774 197 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 FFAR4Q5NUL3 377 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
SNRPA1-203ENST00000540017 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 G3V3Q6 166 aa13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 ASB13Q8WXK3 278 aa13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-203ENST00000540017 RYR2Q92736 4967 aa13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 ZNF253O75346 499 aa13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 OR2T35Q8NGX2 323 aa13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 BLNKQ8WV28 456 aa13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 FUT9Q9Y231 359 aa13.18□□□□□ -0.3
SNRPA1-203ENST00000540017 RNF222A6NCQ9 220 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 EIF3GO75821 320 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 NEU1Q99519 415 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 LYSTQ99698 3801 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 CELA1Q9UNI1 258 aa13.17□□□□□ -0.3
SNRPA1-203ENST00000540017 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 FXYD6-FXYD2A0A087WZ82 144 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 M0R3E3 92 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 OR10J4P0C629 311 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms