RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NPPCP23582 126 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 WFDC9Q8NEX5 89 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 METTL26Q96S19 204 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 TXNDC17Q9BRA2 123 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 PEMTQ9UBM1 199 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 IGHV3-49A0A0A0MS15 119 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 F6UZH7 168 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 NBEAP1P0C6P0 100 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 HIST1H1EP10412 219 aaKnown RBP13.06□□□□□ -0.32
CLN6-202ENST00000538696 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
CLN6-202ENST00000538696 DAZ1Q9NQZ3 744 aaKnown RBP13.06□□□□□ -0.32
CLN6-202ENST00000538696 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 K7EMT4 169 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 PDE6DO43924 150 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
CLN6-202ENST00000538696 CSN3P07498 182 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 CRYBB3P26998 211 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 ATRAIDQ6UW56 229 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
CLN6-202ENST00000538696 U3KQE9 123 aa13.05□□□□□ -0.32
CLN6-202ENST00000538696 IGHV3OR16-13A0A075B7E8 117 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 IGHV3-74A0A0B4J1X5 117 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 S100A7P31151 101 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 C11orf52Q96A22 123 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 C17orf77Q96MU5 243 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 ELOVL1Q9BW60 279 aa13.04□□□□□ -0.32
CLN6-202ENST00000538696 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 BUB3O43684 328 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 SCO1O75880 301 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 FOLR2P14207 255 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
CLN6-202ENST00000538696 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
CLN6-202ENST00000538696 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
CLN6-202ENST00000538696 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 OR8I2Q8N0Y5 310 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 SVBPQ8N300 66 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 PARLQ9H300 379 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
CLN6-202ENST00000538696 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 SLC17A3O00476 420 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 SAP30O75446 220 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 NDUFB4O95168 129 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 IGLL1P15814 213 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 CBLN1P23435 193 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 DERL1Q9BUN8 251 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 SIGLEC8Q9NYZ4 499 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 RNF24Q9Y225 148 aa13.02□□□□□ -0.33
CLN6-202ENST00000538696 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
CLN6-202ENST00000538696 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
CLN6-202ENST00000538696 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
CLN6-202ENST00000538696 Q9H3A6 140 aa13.01□□□□□ -0.33
CLN6-202ENST00000538696 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
CLN6-202ENST00000538696 SELENOKQ9Y6D0 94 aa13.01□□□□□ -0.33
CLN6-202ENST00000538696 CHEK1O14757 476 aa13□□□□□ -0.33
CLN6-202ENST00000538696 ATF4P18848 351 aaPredicted RBP13□□□□□ -0.33
CLN6-202ENST00000538696 GNG5P63218 68 aa13□□□□□ -0.33
CLN6-202ENST00000538696 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
CLN6-202ENST00000538696 C9orf66Q5T8R8 295 aa13□□□□□ -0.33
CLN6-202ENST00000538696 C16orf54Q6UWD8 224 aa13□□□□□ -0.33
CLN6-202ENST00000538696 CLRN3Q8NCR9 226 aa13□□□□□ -0.33
CLN6-202ENST00000538696 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
CLN6-202ENST00000538696 OTORQ9NRC9 128 aa13□□□□□ -0.33
CLN6-202ENST00000538696 MLXQ9UH92 298 aa13□□□□□ -0.33
CLN6-202ENST00000538696 PGPA6NDG6 321 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 SNAPINO95295 136 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
CLN6-202ENST00000538696 SIGLEC15Q6ZMC9 328 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 GPR82Q96P67 336 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 RHPN1-AS1Q9BWJ2 59 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
CLN6-202ENST00000538696 A0A087X0K7 114 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 M0R036 132 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 GALR1P47211 349 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 FAM74A3Q4VXF1 159 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
CLN6-202ENST00000538696 ZNF785A8K8V0 405 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 PEX7O00628 323 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 IGLV1-51P01701 117 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 AKR1C3P42330 323 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 PDE6HQ13956 83 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 EPDR1Q9UM22 224 aa12.97□□□□□ -0.33
CLN6-202ENST00000538696 RPH3ALQ9UNE2 315 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms