RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RYR3Q15413 4870 aa12.56□□□□□ -0.4
GPN3-202ENST00000537466 LYSTQ99698 3801 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 PMS2P11Q13670 270 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 GCSAMLQ5JQS6 135 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 Q8NAQ8 132 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 MED28Q9H204 178 aa12.55□□□□□ -0.4
GPN3-202ENST00000537466 C11orf68Q9H3H3 251 aaKnown RBP12.55□□□□□ -0.4
GPN3-202ENST00000537466 H3BTX0 84 aa12.54□□□□□ -0.4
GPN3-202ENST00000537466 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
GPN3-202ENST00000537466 LRRC20Q8TCA0 184 aa12.54□□□□□ -0.4
GPN3-202ENST00000537466 ATP5SQ99766 215 aa12.54□□□□□ -0.4
GPN3-202ENST00000537466 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
GPN3-202ENST00000537466 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 A8MTW9 85 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 H3BQ15 152 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 SLC17A3O00476 420 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
GPN3-202ENST00000537466 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 IGLC2P0DOY2 106 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 PSG9Q00887 426 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
GPN3-202ENST00000537466 RGS21Q2M5E4 152 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 CXCL2P19875 107 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 CNN1P51911 297 aaKnown RBP12.53□□□□□ -0.4
GPN3-202ENST00000537466 PSG3Q16557 428 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 LCN15Q6UWW0 184 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
GPN3-202ENST00000537466 ZNF331Q9NQX6 463 aaPredicted RBP12.53□□□□□ -0.4
GPN3-202ENST00000537466 MIFP14174 115 aa12.52□□□□□ -0.41
GPN3-202ENST00000537466 SLC50A1Q9BRV3 221 aa12.52□□□□□ -0.41
GPN3-202ENST00000537466 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
GPN3-202ENST00000537466 HRH4Q9H3N8 390 aa12.52□□□□□ -0.41
GPN3-202ENST00000537466 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
GPN3-202ENST00000537466 OXA1LQ15070 435 aa12.51□□□□□ -0.41
GPN3-202ENST00000537466 SAT2Q96F10 170 aaPredicted RBP12.51□□□□□ -0.41
GPN3-202ENST00000537466 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
GPN3-202ENST00000537466 ZNF586Q9NXT0 402 aa12.51□□□□□ -0.41
GPN3-202ENST00000537466 ZNF705FA8MVS1 300 aaPredicted RBP12.5□□□□□ -0.41
GPN3-202ENST00000537466 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
GPN3-202ENST00000537466 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
GPN3-202ENST00000537466 PLECQ15149 4684 aaKnown RBP12.5□□□□□ -0.41
GPN3-202ENST00000537466 Q5BKY6 102 aa12.5□□□□□ -0.41
GPN3-202ENST00000537466 ZNF705AQ6ZN79 300 aaPredicted RBP12.5□□□□□ -0.41
GPN3-202ENST00000537466 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
GPN3-202ENST00000537466 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 PYYP10082 97 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
GPN3-202ENST00000537466 MIR17HGQ75NE6 70 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 OR8A1Q8NGG7 326 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 RPUSD4Q96CM3 377 aaKnown RBP12.49□□□□□ -0.41
GPN3-202ENST00000537466 SLC25A2Q9BXI2 301 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 RFNGQ9Y644 331 aa12.49□□□□□ -0.41
GPN3-202ENST00000537466 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 M0R2Z0 102 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 GUK1Q16774 197 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 SPINK13Q1W4C9 94 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 TMEM14CQ9P0S9 112 aa12.48□□□□□ -0.41
GPN3-202ENST00000537466 LCE6AA0A183 80 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 IFNA5P01569 189 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 GIPP09681 153 aaPredicted RBP12.47□□□□□ -0.41
GPN3-202ENST00000537466 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
GPN3-202ENST00000537466 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 PHLDA1Q8WV24 401 aaPredicted RBP12.47□□□□□ -0.41
GPN3-202ENST00000537466 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 RYR2Q92736 4967 aa12.47□□□□□ -0.41
GPN3-202ENST00000537466 TRBV19A0A075B6N1 114 aa12.46□□□□□ -0.41
GPN3-202ENST00000537466 NUPR2A6NF83 97 aa12.46□□□□□ -0.41
GPN3-202ENST00000537466 CRXO43186 299 aaPredicted RBP12.46□□□□□ -0.41
GPN3-202ENST00000537466 NEU1Q99519 415 aa12.46□□□□□ -0.41
GPN3-202ENST00000537466 PARD6GQ9BYG4 376 aaPredicted RBP12.46□□□□□ -0.41
GPN3-202ENST00000537466 NDUFB4O95168 129 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 HIST1H1EP10412 219 aaKnown RBP12.46□□□□□ -0.42
GPN3-202ENST00000537466 RHOBP62745 196 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 BAP18Q8IXM2 172 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 IGF2BP2-AS1Q96M15 143 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 CELA1Q9UNI1 258 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 FUT9Q9Y231 359 aa12.46□□□□□ -0.42
GPN3-202ENST00000537466 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 BOLA2-SMG1P6H3BVE0 249 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 ZNF253O75346 499 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 ASB13Q8WXK3 278 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 MRPL32Q9BYC8 188 aaKnown RBP12.45□□□□□ -0.42
GPN3-202ENST00000537466 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
GPN3-202ENST00000537466 ALMS1Q8TCU4 4167 aa12.44□□□□□ -0.42
GPN3-202ENST00000537466 HYDINQ4G0P3 5121 aa12.43□□□□□ -0.42
GPN3-202ENST00000537466 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms