RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 RUNX3Q13761 415 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 CST6Q15828 149 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 SPRNQ5BIV9 151 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 SLC25A53Q5H9E4 307 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 C10orf128Q5T292 105 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 RHBDD2Q6NTF9 364 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 ZFP2Q6ZN57 461 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 MOB1BQ7L9L4 216 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 ATP5L2Q7Z4Y8 100 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 MOB3BQ86TA1 216 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF329Q86UD4 541 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 C11orf53Q8IXP5 236 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 OR8A1Q8NGG7 326 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 PIFOQ8TCI5 191 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 RNF138Q8WVD3 245 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 PIGCQ92535 297 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 RPEQ96AT9 228 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 DNAJC30Q96LL9 226 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 ODF3Q96PU9 254 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 PRRG4Q9BZD6 226 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 PROK2Q9HC23 129 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 RAB9BQ9NP90 201 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 MDFICQ9P1T7 246 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 HHLA3Q9XRX5 114 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 U3KQK5 164 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 C2orf16Q68DN1 1984 aa2.48□□□□□ -2.01
CSDE1-216ENST00000534389 NOTCH4Q99466 2003 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 NCKAP5O14513 1909 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TEX50A0A1B0GTY4 177 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 A0A1W2PPI3 338 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 A0A1W2PR77 199 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 C15orf65H3BRN8 121 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 PEX7O00628 323 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 MPDU1O75352 247 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 FSTL3O95633 263 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 MOSP00540 346 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TGFAP01135 160 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 IGHV4-39P01824 125 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 IGHG3P01860 377 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF688P0C7X2 276 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 LINC00694P0DN24 101 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 IFI27P40305 119 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-216ENST00000534389 IL11RAQ14626 422 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 MEIG1Q5JSS6 88 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 ZC2HC1BQ5TFG8 222 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 FAM27BQ5VT28 67 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 C18orf65Q6ZTR6 163 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 RPRMLQ8N4K4 120 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TEX29Q8N6K0 151 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 FADS6Q8N9I5 356 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 COQ2Q96H96 371 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF414Q96IQ9 312 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 BMFQ96LC9 184 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 SGK494Q96LW2 274 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 HSD17B10Q99714 261 aaKnown RBP2.47□□□□□ -2.01
CSDE1-216ENST00000534389 NABP2Q9BQ15 211 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 SLC25A2Q9BXI2 301 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 SPRY4Q9C004 299 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 RPP21Q9H633 154 aaKnown RBP2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM167BQ9NRX6 74 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 ONECUT1Q9UBC0 465 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 FZR1Q9UM11 496 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF407Q9C0G0 2248 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 KMT2EQ8IZD2 1858 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 TET1Q8NFU7 2136 aa2.47□□□□□ -2.01
CSDE1-216ENST00000534389 IGKV1OR2-108A0A075B7D4 117 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 IGLV3-32A0A0A0MS00 114 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 PIGBOS1A0A0B4J2F0 54 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-20A0A0C4DH32 117 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 SCGB2A1O75556 95 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 OXTP01178 125 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 PYYP10082 97 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 IFITM1P13164 125 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF32P17041 273 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 RPL7P18124 248 aaKnown RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 EVI2AP22794 236 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 GLRXP35754 106 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 CSN1S1P47710 185 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 PSMB2P49721 201 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 ESPL1Q14674 2120 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 PRR30Q53SZ7 412 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 Q6Q795 121 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 PATE2Q6UY27 113 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF497Q6ZNH5 498 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 RBPMS2Q6ZRY4 209 aaKnown RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 Q75L30 129 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 H2BFWTQ7Z2G1 175 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 FAM19A5Q7Z5A7 132 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 GTSCR1Q86UQ5 136 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 TUSC5Q8IXB3 177 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 VKORC1L1Q8N0U8 176 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 SLC22A18ASQ8N1D0 253 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 ANKRD29Q8N6D5 301 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 OR9G1Q8NH87 305 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 RFESDQ8TAC1 157 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 BAALCQ8WXS3 180 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms