RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 PRB4P10163 310 aaPredicted RBP5.42□□□□□ -1.54
USP48-212ENST00000527823 UCP1P25874 307 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 RCVRNP35243 200 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 PIGPP57054 158 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
USP48-212ENST00000527823 TSPAN5P62079 268 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 TRIM16LQ309B1 348 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 SP6Q3SY56 376 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 TMEM144Q7Z5S9 345 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 OR8I2Q8N0Y5 310 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 TMEM256Q8N2U0 113 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 OR52E5Q8NH55 327 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 LHFPL5Q8TAF8 219 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 C3orf85A0A1B0GTC6 90 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 ZFP92A6NM28 416 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 PGAM2P15259 253 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 HIST1H1AQ02539 215 aaPredicted RBP5.41□□□□□ -1.54
USP48-212ENST00000527823 OR2F1Q13607 317 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 UBE2NLQ5JXB2 153 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 ETFRF1Q6IPR1 90 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 ZNF493Q6ZR52 646 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 Q6ZSA8 131 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 TMED4Q7Z7H5 227 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 NFE4Q86UQ8 179 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 LHFPL1Q86WI0 220 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
USP48-212ENST00000527823 GPX8Q8TED1 209 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 ZNF486Q96H40 463 aaPredicted RBP5.41□□□□□ -1.54
USP48-212ENST00000527823 URB1-AS1Q96HZ7 61 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 SLC25A22Q9H936 323 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 CACNG5Q9UF02 275 aa5.41□□□□□ -1.54
USP48-212ENST00000527823 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 CEBPZOSA8MTT3 80 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 ADAP1O75689 374 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 ATG12O94817 140 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 RLN2P04090 185 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 ZNF182P17025 639 aaPredicted RBP5.4□□□□□ -1.54
USP48-212ENST00000527823 GALR1P47211 349 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 Q6ZTI0 123 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 ZNF738Q8NE65 137 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 TMEM18Q96B42 140 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 PPP1R14BQ96C90 147 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 RSG1Q9BU20 258 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 PARD6GQ9BYG4 376 aaPredicted RBP5.4□□□□□ -1.54
USP48-212ENST00000527823 RBM38Q9H0Z9 239 aaKnown RBP5.4□□□□□ -1.54
USP48-212ENST00000527823 SSR3Q9UNL2 185 aa5.4□□□□□ -1.54
USP48-212ENST00000527823 LOC100506127A0A0U1RQW1 187 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 LRCOL1A6NCL2 159 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 ZNF98A6NK75 572 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 H7BYZ3 331 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 OR5AC1P0C628 307 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 PRSS3P35030 304 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 TGFBR1P36897 503 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 GAMTQ14353 236 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 MEF2DQ14814 521 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 BAK1Q16611 211 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 GFI1BQ5VTD9 330 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 WFDC10BQ8IUB3 73 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 FAM219AQ8IW50 185 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 SAMD12Q8N8I0 201 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 OR8A1Q8NGG7 326 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 IL22RA2Q969J5 263 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 S100A16Q96FQ6 103 aaKnown RBP5.39□□□□□ -1.55
USP48-212ENST00000527823 BLOC1S6Q9UL45 172 aa5.39□□□□□ -1.55
USP48-212ENST00000527823 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 CDS2O95674 445 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 OXTP01178 125 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 CDKN1BP46527 198 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 GABARAPL2P60520 117 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 RHOBP62745 196 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 Q8N814 137 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 OR13C8Q8NGS7 320 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 RBPMSQ93062 196 aaKnown RBP5.38□□□□□ -1.55
USP48-212ENST00000527823 SLC35E1Q96K37 410 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 CNBD2Q96M20 576 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 TRGV9Q99603 122 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 TMEM222Q9H0R3 208 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.38□□□□□ -1.55
USP48-212ENST00000527823 LY96Q9Y6Y9 160 aa5.38□□□□□ -1.55
USP48-212ENST00000527823 SNRPGP15A8MWD9 76 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 SNURFLB1AK76 121 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 H3BRN7 92 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 C1QBP02746 253 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 CXCL3P19876 107 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 FGL1Q08830 312 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 SNX29P2Q8IUI4 249 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 Q8N9P0 234 aaPredicted RBP5.37□□□□□ -1.55
USP48-212ENST00000527823 CCDC71LQ8N9Z2 235 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 THAP8Q8NA92 274 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 OR1B1Q8NGR6 318 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 GLYATL2Q8WU03 294 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 COPZ2Q9P299 210 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
USP48-212ENST00000527823 FABP1P07148 127 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 GATA2P23769 480 aaPredicted RBP5.36□□□□□ -1.55
USP48-212ENST00000527823 TMEM182Q6ZP80 229 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms