RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GNPNAT1Q96EK6 184 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-222ENST00000520948 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 TMEM14CQ9P0S9 112 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 FUT9Q9Y231 359 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 H3BQ15 152 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 ATF4P18848 351 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-222ENST00000520948 M6PRP20645 277 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 PSMB3P49720 205 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 HAGHQ16775 308 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 ACOT6Q3I5F7 207 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-222ENST00000520948 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 HYLS1Q96M11 299 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 SH3BGRL3Q9H299 93 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 HRH4Q9H3N8 390 aa13.38□□□□□ -0.27
VEGFA-222ENST00000520948 ID1P41134 155 aa13.37□□□□□ -0.27
VEGFA-222ENST00000520948 SNRPD3P62318 126 aaKnown RBP13.37□□□□□ -0.27
VEGFA-222ENST00000520948 SAT2Q96F10 170 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-222ENST00000520948 BCL2L11O43521 198 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 RAB2AP61019 212 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 RHOBP62745 196 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 PSMG4Q5JS54 123 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 RPP25LQ8N5L8 163 aaKnown RBP13.36□□□□□ -0.27
VEGFA-222ENST00000520948 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 C20orf173Q96LM9 149 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 RETNQ9HD89 108 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 ZNF586Q9NXT0 402 aa13.36□□□□□ -0.27
VEGFA-222ENST00000520948 HIST1H1EP10412 219 aaKnown RBP13.35□□□□□ -0.27
VEGFA-222ENST00000520948 SPP1P10451 314 aa13.35□□□□□ -0.27
VEGFA-222ENST00000520948 OR10G4Q8NGN3 311 aa13.35□□□□□ -0.27
VEGFA-222ENST00000520948 OR10G9Q8NGN4 311 aa13.35□□□□□ -0.27
VEGFA-222ENST00000520948 OR10G7Q8NGN6 311 aa13.35□□□□□ -0.27
VEGFA-222ENST00000520948 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-222ENST00000520948 HYDINQ4G0P3 5121 aa13.35□□□□□ -0.27
VEGFA-222ENST00000520948 LOC102724200A0A096LPH7 203 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-222ENST00000520948 KANTRA0A1W2PQU2 76 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 MBP02144 154 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
VEGFA-222ENST00000520948 PYYP10082 97 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 GUK1Q16774 197 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 IGFL4Q6B9Z1 124 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
VEGFA-222ENST00000520948 TRBV19A0A075B6N1 114 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 KNCNA6PVL3 124 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 ZNF253O75346 499 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 LINC00052Q96N35 136 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 SLC50A1Q9BRV3 221 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 RPRMQ9NS64 109 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 PLA2G2EQ9NZK7 142 aa13.33□□□□□ -0.28
VEGFA-222ENST00000520948 H3BTX0 84 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 SLC17A3O00476 420 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 NDUFB4O95168 129 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 DEFB1P60022 68 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 PSG3Q16557 428 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 TMEM41BQ5BJD5 291 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 TRPT1Q86TN4 253 aaKnown RBP13.32□□□□□ -0.28
VEGFA-222ENST00000520948 FXYD5Q96DB9 178 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 PAXXQ9BUH6 204 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 ZNF471Q9BX82 626 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-222ENST00000520948 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-222ENST00000520948 AGRNO00468 2067 aa13.32□□□□□ -0.28
VEGFA-222ENST00000520948 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 A0A1W2PPV4 95 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 H3BMM0 161 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
VEGFA-222ENST00000520948 NBEAP1P0C6P0 100 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 HLA-DMBP28068 263 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 TAS2R45P59539 299 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 PDE6HQ13956 83 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 GDF5OSQ5U4N7 250 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 FOXI2Q6ZQN5 318 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 LRRC20Q8TCA0 184 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 RNF141Q8WVD5 230 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 RAB24Q969Q5 203 aa13.31□□□□□ -0.28
VEGFA-222ENST00000520948 PFDN1O60925 122 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 STAG3L2P0CL84 134 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 STAG3L3P0CL85 134 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 HLA-DRB4P13762 266 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
VEGFA-222ENST00000520948 CDC34P49427 236 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-222ENST00000520948 ZFP69Q49AA0 526 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 KHDC3LQ587J8 217 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 STHQ8IWL8 128 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 BAP18Q8IXM2 172 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 STOML3Q8TAV4 291 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 CLUHP3Q96NS8 147 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 CLEC5AQ9NY25 188 aa13.3□□□□□ -0.28
VEGFA-222ENST00000520948 HLA-DRB4X5D2U9 266 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 361.9 ms