RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 TRAV8-2A0A0B4J237 113 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
VEGFA-221ENST00000520265 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 LCN15Q6UWW0 184 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 NPCDR1Q9BY65 106 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 X6R8D5 127 aa10.28□□□□□ -0.76
VEGFA-221ENST00000520265 STARD9Q9P2P6 4700 aa10.27□□□□□ -0.76
VEGFA-221ENST00000520265 TRAV5A0A0B4J249 113 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-221ENST00000520265 H0YIZ8 118 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 MPDU1O75352 247 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 LY6G6CO95867 125 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 PTTG1O95997 202 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
VEGFA-221ENST00000520265 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
VEGFA-221ENST00000520265 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
VEGFA-221ENST00000520265 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 MBD2Q9UBB5 411 aa10.27□□□□□ -0.77
VEGFA-221ENST00000520265 M0R2Z0 102 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 MPC2O95563 127 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 CXCL3P19876 107 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PRR20EP86478 221 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PRR20CP86479 221 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PRR20DP86480 221 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PRR20BP86481 221 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PRR20AP86496 221 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 PSG3Q16557 428 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF767PQ75MW2 155 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 RPUSD4Q96CM3 377 aaKnown RBP10.26□□□□□ -0.77
VEGFA-221ENST00000520265 MED28Q9H204 178 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 KCNIP2Q9NS61 270 aa10.26□□□□□ -0.77
VEGFA-221ENST00000520265 CSMD3Q7Z407 3707 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 INSP01308 110 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 IFNA5P01569 189 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 HBE1P02100 147 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 CXCL2P19875 107 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 OR11H7Q8NGC8 314 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 SCGB1C1Q8TD33 95 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 ATP5SQ99766 215 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 TENM2Q9NT68 2774 aa10.25□□□□□ -0.77
VEGFA-221ENST00000520265 TRAV12-2A0A075B6T6 113 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 BOLA2-SMG1P6H3BVE0 249 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 SLC17A3O00476 420 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 AMBPP02760 352 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 RPL12P30050 165 aaKnown RBP10.24□□□□□ -0.77
VEGFA-221ENST00000520265 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 OR8A1Q8NGG7 326 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-221ENST00000520265 HSPB11Q9Y547 144 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 TIMM9Q9Y5J7 89 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 RFNGQ9Y644 331 aa10.24□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-221ENST00000520265 IGLL5B9A064 214 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 H3BQ15 152 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
VEGFA-221ENST00000520265 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 Q6ZTC4 211 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 C2CD4CQ8TF44 421 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 IGF2BP2-AS1Q96M15 143 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 WDR61Q9GZS3 305 aaKnown RBP10.23□□□□□ -0.77
VEGFA-221ENST00000520265 HRH4Q9H3N8 390 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
VEGFA-221ENST00000520265 LOC102723971A0A1B0GUV8 181 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 J3KRW8 73 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 IGLC2P0DOY2 106 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 PYYP10082 97 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 HTN1P15515 57 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 FCN2Q15485 313 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 GUK1Q16774 197 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF705AQ6ZN79 300 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-221ENST00000520265 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 RNF126Q9BV68 326 aa10.22□□□□□ -0.77
VEGFA-221ENST00000520265 TRAV10A0A0B4J240 114 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 TMEM189A5PLL7 270 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 OR7C2O60412 319 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 HTN3P15516 51 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 FFAR4Q5NUL3 377 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 AMTNQ6UX39 209 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 MIR17HGQ75NE6 70 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 LINC01587Q99440 93 aa10.21□□□□□ -0.77
VEGFA-221ENST00000520265 ZNF705GA8MUZ8 300 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-221ENST00000520265 OR10J4P0C629 311 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 RGS21Q2M5E4 152 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 C1orf158Q8N1D5 194 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 CHAC2Q8WUX2 184 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms