RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 A0A1B0GWA3 101 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 ZNF98A6NK75 572 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 KPNA4O00629 521 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 COPEO14579 308 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 C1QCP02747 245 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 GUSBP08236 651 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 LINC00614P0C842 121 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 MIFP14174 115 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 CTLA4P16410 223 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 GADD45AP24522 165 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 CDK2P24941 298 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 NFYBP25208 207 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 PSMA1P25786 263 aaKnown RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 CRABP2P29373 138 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 BLVRBP30043 206 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 REG1BP48304 166 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 DAD1P61803 113 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 TMEM241Q24JQ0 296 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 CENPWQ5EE01 88 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 COQ5Q5HYK3 327 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 AMN1Q8IY45 258 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 MRPS26Q9BYN8 205 aaKnown RBP2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 RERGLQ9H628 205 aa2.77□□□□□ -1.97
HMGB1P23-201ENST00000518743 A0A087WTM6 91 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 TRAPPC13A5PLN9 417 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 METTL15A6NJ78 407 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 C2orf70A6NJV1 201 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 MIF4GDA9UHW6 222 aaKnown RBP2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 RBBP9O75884 186 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR5F1O95221 314 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 IGHV3-7P01780 117 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 GYPCP04921 128 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 IFNGR2P38484 337 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 H2BFSP57053 126 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 RPL38P63173 70 aaKnown RBP2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 HBA1P69905 142 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 DIAPH2-AS1Q14236 149 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 SLC25A34Q6PIV7 304 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 LRRC34Q8IZ02 419 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 LINC00471Q8N535 108 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 FER1L6-AS1Q8NA97 138 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR10X1Q8NGY0 326 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 PPP1R14BQ96C90 147 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 ZNF436Q9C0F3 470 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 TLNRD1Q9H1K6 362 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 FBXL15Q9H469 300 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 ATPIF1Q9UII2 106 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 LINC00312Q9Y6C7 94 aa2.76□□□□□ -1.97
HMGB1P23-201ENST00000518743 TINCRA0A1B0GVN0 87 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 F5H768 121 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 H7C1C5 153 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 AZIN1O14977 448 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 ARL6IP5O75915 188 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 HBZP02008 142 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 ISG15P05161 165 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 RPS17P08708 135 aaKnown RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 NEFHP12036 1026 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 MYL12AP19105 171 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 GNG10P50151 68 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 EMP1P54849 157 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 RAB2AP61019 212 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 LCN6P62502 163 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 DEFA5Q01523 94 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 RPL18Q07020 188 aaKnown RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 TMEM267Q0VDI3 215 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 MLLT11Q13015 90 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 TMEM69Q5SWH9 247 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 GLYATL3Q5SZD4 288 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 UNQ5815/PRO19632Q6UWF5 114 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 Q6ZRU5 148 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 SCXQ7RTU7 201 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 TMEM144Q7Z5S9 345 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 DAZ4Q86SG3 579 aaKnown RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 NAA40Q86UY6 237 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 NIT1Q86X76 327 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 CTAGE3PQ8IX95 158 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR6V1Q8N148 313 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR8B12Q8NGG6 310 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR5D18Q8NGL1 313 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 ASB13Q8WXK3 278 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 FXYD5Q96DB9 178 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 CST11Q9H112 138 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 DAZ1Q9NQZ3 744 aaKnown RBP2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 BABAM2Q9NXR7 383 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 SLC22A13Q9Y226 551 aa2.75□□□□□ -1.97
HMGB1P23-201ENST00000518743 IGHV3OR16-8A0A075B7F1 116 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 TRGV10A0A0A0MS01 117 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 TMEM210A6NLX4 147 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 HMGN4O00479 90 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 DCTN3O75935 186 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms