RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 LYNX1G3V0Z9 82 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 LYNX1P0DP58 116 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 MESP1Q9BRJ9 268 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 LINC00527Q9UJ94 153 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 F8W1H4 67 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 LEPROTO15243 131 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 LINC00205P59089 165 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 Q6ZS49 121 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 SPXQ9BT56 116 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 LIME1Q9H400 295 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 C10orf91Q5T1B1 145 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 DOCK6Q96HP0 2047 aa10.83□□□□□ -0.68
TCOF1-214ENST00000515035 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 LY6DQ14210 128 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 SBF1O95248 1867 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 IGHV2-26A0A0B4J1V2 119 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-214ENST00000515035 MLANAQ16655 118 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 RCHY1Q96PM5 261 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 KLHDC3Q9BQ90 382 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 A0A1W2PRX2 142 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 GAGE12HA6NDE8 117 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 LY6G5BQ8NDX9 201 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 ACACAQ13085 2346 aa10.82□□□□□ -0.68
TCOF1-214ENST00000515035 UNQ6494/PRO21346Q6UXR6 183 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 FANCMQ8IYD8 2048 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 PKDREJQ9NTG1 2253 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
TCOF1-214ENST00000515035 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
TCOF1-214ENST00000515035 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
TCOF1-214ENST00000515035 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 FNDC10F2Z333 226 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 COX8AP10176 69 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 CFHR2P36980 270 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 PRSS57Q6UWY2 283 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 CYYR1Q96J86 154 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 FER1L5A0AVI2 2057 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 LINC00477Q96M19 166 aa10.81□□□□□ -0.68
TCOF1-214ENST00000515035 TRAV41A0A0B4J266 112 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 IGHV1-3A0A0C4DH29 117 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 H0YJW9 148 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 IGHV1-8P0DP01 117 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 Q6P435 159 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 PI4KAP42356 2102 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 TCF15Q12870 199 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 BVES-AS1Q5T3Y7 98 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 SIP14410 1827 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 A0A087WX48 190 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 TMEM200BQ69YZ2 307 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 GGNQ86UU5 652 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 ZNF492Q9P255 531 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 MMP23AO75900 390 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 ZNF688P0C7X2 276 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 C6orf226Q5I0X4 101 aa10.8□□□□□ -0.68
TCOF1-214ENST00000515035 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-214ENST00000515035 A0A1W2PPM0 123 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 IFITM1P13164 125 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 SLC25A16P16260 332 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 AZU1P20160 251 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 TRAV13-1A0A0B4J241 112 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 NDPQ00604 133 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 CT83Q5H943 113 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 FAM104BQ5XKR9 115 aa10.79□□□□□ -0.68
TCOF1-214ENST00000515035 A0A087WWL8 130 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 IL18BPO95998 194 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 VDAC2P45880 294 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-214ENST00000515035 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 RNF5Q99942 180 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 E9PQ18 207 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 WNT2P09544 360 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 SLX1AQ9BQ83 275 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
TCOF1-214ENST00000515035 H3BMG7 143 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 SOCS3O14543 225 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 FCN3O75636 299 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 ERCC8Q13216 396 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 ZNF726P1Q15940 193 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 PRADC1Q9BSG0 188 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 SHANK1Q9Y566 2161 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 CFPP27918 469 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 MORN5Q5VZ52 161 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 SIGLEC9Q9Y336 463 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 V9GYV3 84 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 THADAQ6YHU6 1953 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms