RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 RCL1Q9Y2P8 373 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 BRCA2P51587 3418 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PTPRSQ13332 1948 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 ANAPC1Q9H1A4 1944 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236DA0A1B0GTK5 79 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 A8MWL6 223 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 ATOX1O00244 68 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 NGFP01138 241 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHV4-31P0DP07 118 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236CP0DP71 79 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 COX7CP15954 63 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 CRYGSP22914 178 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 CSN1S1P47710 185 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 VMA21Q3ZAQ7 101 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q5XG85 94 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MEX3DQ86XN8 651 aaKnown RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MMD2Q8IY49 270 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM252Q8N6L7 170 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MAPKAPK5-AS1Q8N8E1 139 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR2A1Q8NGT9 310 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR10AC1Q8NH08 325 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FGFBP3Q8TAT2 258 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MGST2Q99735 147 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDCD1LG2Q9BQ51 273 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 RNASE7Q9H1E1 156 aaKnown RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 RETNQ9HD89 108 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TNFRSF19Q9NS68 423 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF256Q9Y2P7 627 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 HILPDAQ9Y5L2 63 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM14AQ9Y6G1 99 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 DOCK4Q8N1I0 1966 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDE4DIPQ5VU43 2346 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MYO9BQ13459 2157 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 DOCK6Q96HP0 2047 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CEP290O15078 2479 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV8-2A0A0B4J237 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV8-4A0A0B4J246 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 A0A0U1RQV1 116 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 LOC107986453A0A1B0GWG9 222 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C11orf94C9JXX5 98 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 F2Z2F3 143 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC01619G3V211 115 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDCD6O75340 191 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZFAND5O76080 213 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 NUDT14O95848 222 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 IL4P05112 153 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ACYP1P07311 99 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 P0DMU3 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM231AP0DMU4 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM231CP0DMU5 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FGF6P10767 208 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF136P52737 540 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf61Q13536 156 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM187Q14656 261 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ABCA11PQ4W5N1 156 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf100Q5SVJ3 147 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 MRPL2Q5T653 305 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q6ZS52 159 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ATP5L2Q7Z4Y8 100 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 RPS19BP1Q86WX3 136 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SBSPONQ8IVN8 264 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CEND1Q8N111 149 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 THAP8Q8NA92 274 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 DPH3Q96FX2 82 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SMIM14Q96QK8 99 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SLC25A2Q9BXI2 301 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRRG4Q9BZD6 226 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF442Q9H7R0 627 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 KLF13Q9Y2Y9 288 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 F5P12259 2224 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CPAMD8Q8IZJ3 1885 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SCN2AQ99250 2005 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV27A0A087WT01 109 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 C15orf61A6NNL5 157 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 H7C1H1 209 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 CCL22O00626 93 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 CDK2AP2O75956 126 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 PYYP10082 97 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 COX5AP20674 150 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 HLA-DMBP28068 263 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 INSL3P51460 131 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms