RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 MYOZ3Q8TDC0 251 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 BMI1P35226 326 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 FOXC2Q99958 501 aa11.95□□□□□ -0.5
USP38-202ENST00000510377 FER1L6-AS1Q8NA97 138 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 RNASE6Q93091 150 aaKnown RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 MBD3L3A6NE82 208 aaPredicted RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 RPL7P18124 248 aaKnown RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 POU2AF1Q16633 256 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
USP38-202ENST00000510377 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 IGLC7A0M8Q6 106 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 LY6HO94772 140 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 MGPP08493 103 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 PRSS57Q6UWY2 283 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 RITA1Q96K30 269 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
USP38-202ENST00000510377 ZNF833PQ6ZTB9 187 aa11.93□□□□□ -0.5
USP38-202ENST00000510377 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
USP38-202ENST00000510377 HBDP02042 147 aa11.93□□□□□ -0.5
USP38-202ENST00000510377 MSRB2Q9Y3D2 182 aa11.93□□□□□ -0.5
USP38-202ENST00000510377 C1orf159Q96HA4 380 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 LEPP41159 167 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 SFTA2Q6UW10 78 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
USP38-202ENST00000510377 NDUFB8O95169 186 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 OCIAD2Q56VL3 154 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 BVES-AS1Q5T3Y7 98 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 USP34Q70CQ2 3546 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 F5H697 171 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 HIST1H4GQ99525 98 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
USP38-202ENST00000510377 C22orf46C9J442 243 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 RAB1BQ9H0U4 201 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 DKK4Q9UBT3 224 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 SONP18583 2426 aaKnown RBP11.91□□□□□ -0.5
USP38-202ENST00000510377 EYSQ5T1H1 3165 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 UBTD1Q9HAC8 227 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
USP38-202ENST00000510377 DPM3Q9P2X0 92 aa11.91□□□□□ -0.5
USP38-202ENST00000510377 KLRD1Q13241 179 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
USP38-202ENST00000510377 TMEM78Q5T7P6 136 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 GOSR1O95249 250 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 CD5LO43866 347 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 LHBP01229 141 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 GATA4P43694 442 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
USP38-202ENST00000510377 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.5
USP38-202ENST00000510377 A0A0G2JLM5 398 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 KIR3DS1Q14943 382 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 PIP4P1Q86T03 277 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 GTSCR1Q86UQ5 136 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 SH2D1AO60880 128 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 WIPF2Q8TF74 440 aaPredicted RBP11.89□□□□□ -0.51
USP38-202ENST00000510377 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 MYO15AQ9UKN7 3530 aa11.89□□□□□ -0.51
USP38-202ENST00000510377 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.88□□□□□ -0.51
USP38-202ENST00000510377 NBR2O15453 112 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 SCGB1C2P0DMR2 95 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 CTRLP40313 264 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 Q6AWC8 147 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 PAX1P15863 534 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 LOXP28300 417 aaPredicted RBP11.88□□□□□ -0.51
USP38-202ENST00000510377 APOBEC3AP31941 199 aaPredicted RBP11.88□□□□□ -0.51
USP38-202ENST00000510377 SEC11AP67812 179 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
USP38-202ENST00000510377 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 JKAMPQ9P055 326 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 A0A0G2JNJ9 132 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 C2orf70A6NJV1 201 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 NDUFA3O95167 84 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 PSG3Q16557 428 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 Q9UFV3 132 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 M0R381 172 aa11.88□□□□□ -0.51
USP38-202ENST00000510377 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
USP38-202ENST00000510377 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
USP38-202ENST00000510377 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
USP38-202ENST00000510377 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
USP38-202ENST00000510377 SEM1Q6ZVN7 128 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms