RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RNF24Q9Y225 148 aa6.8□□□□□ -1.32
DDX41-209ENST00000508279 WDR83OSQ9Y284 106 aa6.8□□□□□ -1.32
DDX41-209ENST00000508279 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
DDX41-209ENST00000508279 TRAV5A0A0B4J249 113 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 CNN1P51911 297 aaKnown RBP6.79□□□□□ -1.32
DDX41-209ENST00000508279 H2BFSP57053 126 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 RHOBP62745 196 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 HIST1H1AQ02539 215 aaPredicted RBP6.79□□□□□ -1.32
DDX41-209ENST00000508279 OPCMLQ14982 345 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 ATP6V1FQ16864 119 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 SPINK13Q1W4C9 94 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 SPATA31B1PQ5VZV4 182 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 BPIFA4PQ86YQ2 179 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 ZNF709Q8N972 641 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 OR5C1Q8NGR4 320 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 PPP1R1CQ8WVI7 109 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 TMEM208Q9BTX3 173 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 SLC39A9Q9NUM3 307 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 PXMP4Q9Y6I8 212 aa6.79□□□□□ -1.32
DDX41-209ENST00000508279 A0A087X0K7 114 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 H0YIZ8 118 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 M0R2Z0 102 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
DDX41-209ENST00000508279 CXCL3P19876 107 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 PSG3Q16557 428 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 VWC2Q2TAL6 325 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 PFDN5Q99471 154 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 CELA1Q9UNI1 258 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 GOLT1BQ9Y3E0 138 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 ALG5Q9Y673 324 aa6.78□□□□□ -1.32
DDX41-209ENST00000508279 TRAV12-2A0A075B6T6 113 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 ZNF705FA8MVS1 300 aaPredicted RBP6.77□□□□□ -1.33
DDX41-209ENST00000508279 IGLL5B9A064 214 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 SLC17A3O00476 420 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 MRPS12O15235 138 aaKnown RBP6.77□□□□□ -1.33
DDX41-209ENST00000508279 MPC2O95563 127 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 PET100P0DJ07 73 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
DDX41-209ENST00000508279 PRR20EP86478 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 PRR20CP86479 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 PRR20DP86480 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 PRR20BP86481 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 PRR20AP86496 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 LCN15Q6UWW0 184 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 Q6ZTC4 211 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 OR11H7Q8NGC8 314 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 C2CD4CQ8TF44 421 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 RPUSD4Q96CM3 377 aaKnown RBP6.77□□□□□ -1.33
DDX41-209ENST00000508279 SLC50A1Q9BRV3 221 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 MBD2Q9UBB5 411 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 RYR3Q15413 4870 aa6.77□□□□□ -1.33
DDX41-209ENST00000508279 H3BQ15 152 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 MPDU1O75352 247 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 HBE1P02100 147 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 PRM2P04554 102 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 AMTNQ6UX39 209 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 ZNF705AQ6ZN79 300 aaPredicted RBP6.76□□□□□ -1.33
DDX41-209ENST00000508279 BAP18Q8IXM2 172 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 C1orf158Q8N1D5 194 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 OR8A1Q8NGG7 326 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 BLNKQ8WV28 456 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 LYSTQ99698 3801 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 RNF126Q9BV68 326 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 ZNF331Q9NQX6 463 aaPredicted RBP6.76□□□□□ -1.33
DDX41-209ENST00000508279 RFNGQ9Y644 331 aa6.76□□□□□ -1.33
DDX41-209ENST00000508279 DYNC2H1Q8NCM8 4307 aaKnown RBP6.76□□□□□ -1.33
DDX41-209ENST00000508279 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 LOC102723971A0A1B0GUV8 181 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
DDX41-209ENST00000508279 BOLA2-SMG1P6H3BVE0 249 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 J3KRW8 73 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 PTTG1O95997 202 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 INSP01308 110 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 AMBPP02760 352 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 PYYP10082 97 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 HTN1P15515 57 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 CXCL2P19875 107 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 RPL12P30050 165 aaKnown RBP6.75□□□□□ -1.33
DDX41-209ENST00000508279 RRN3P1Q2M238 152 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 C12orf74Q32Q52 190 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 OR10J6PQ8NGY7 276 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 SCGB1C1Q8TD33 95 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 IGF2BP2-AS1Q96M15 143 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 ATP5SQ99766 215 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 PARD6GQ9BYG4 376 aaPredicted RBP6.75□□□□□ -1.33
DDX41-209ENST00000508279 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
DDX41-209ENST00000508279 MED28Q9H204 178 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 HRH4Q9H3N8 390 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 ZNF586Q9NXT0 402 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 HSPB11Q9Y547 144 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 TIMM9Q9Y5J7 89 aa6.75□□□□□ -1.33
DDX41-209ENST00000508279 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
DDX41-209ENST00000508279 TMEM189A5PLL7 270 aa6.74□□□□□ -1.33
DDX41-209ENST00000508279 C11orf94C9JXX5 98 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms