RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CEP290O15078 2479 aa1.92□□□□□ -2.1
TRAPPC13-208ENST00000505553 A0A1W2PRE2 83 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 SDCBPO00560 298 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 CLPSP04118 112 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 ALX1Q15699 326 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 TMEM128Q5BJH2 165 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 SAMD13Q5VXD3 122 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 C22orf39Q6P5X5 142 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 LRRC28Q86X40 367 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 DHFR2Q86XF0 187 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 OR8B3Q8NGG8 313 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 OR4D11Q8NGI4 311 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 GRPEL2Q8TAA5 225 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 STAG3L4Q8TBR4 150 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 C8orf4Q9NR00 106 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 BATF3Q9NR55 127 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 SPANXA1Q9NS26 97 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 FAM208AQ9UK61 1670 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 PTPRSQ13332 1948 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 PRORSD1PA6NEY8 169 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 TLCD2A6NGC4 264 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 M0R378 163 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 FAM107AO95990 144 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 NAPSAO96009 420 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 PMP2P02689 132 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 TRGC2P03986 189 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 RNASE4P34096 147 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 AQP4P55087 323 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 MYL5Q02045 173 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 SLC38A11Q08AI6 406 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 LTC4SQ16873 150 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 ZNF181Q2M3W8 571 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 OR2T10Q8NGZ9 312 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 PPTC7Q8NI37 304 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 TEX37Q96LM6 180 aa1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 GPX7Q96SL4 187 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-208ENST00000505553 ECM29Q5VYK3 1845 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 DOCK3Q8IZD9 2030 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 MEIKINA0A087WXM9 373 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 A0A0G2JQZ4 141 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 FUOMA2VDF0 154 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 H3BRN7 92 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 PGLYRP1O75594 196 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF345Q14585 488 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 SPANXN5Q5MJ07 72 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 ANGPTL5Q86XS5 388 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 LINC00471Q8N535 108 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 OR13D1Q8NGV5 346 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 OR10J5Q8NHC4 309 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 ISOC1Q96CN7 298 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 AIF1LQ9BQI0 150 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 EFCAB11Q9BUY7 163 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 TIMM21Q9BVV7 248 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 GINS2Q9Y248 185 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 NUBP2Q9Y5Y2 271 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 LTN1O94822 1766 aa1.9□□□□□ -2.11
TRAPPC13-208ENST00000505553 PIEZO1Q92508 2521 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 TRPM6Q9BX84 2022 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 CCDC88AQ3V6T2 1871 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 KIF24Q5T7B8 1368 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 DLEC1Q9Y238 1755 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 J3QRE1 110 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 TMEM256-PLSCR3K7ERE1 68 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 NDUFB3O43676 98 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 CRYGAP11844 174 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 PLCXD2Q0VAA5 305 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 NNATQ16517 81 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 FKBP1CQ5VVH2 108 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 Q6ZQT0 140 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 C12orf29Q8N999 325 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 AQP3Q92482 292 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 RMND5BQ96G75 393 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 HSPB9Q9BQS6 159 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 PRADC1Q9BSG0 188 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 MRPL32Q9BYC8 188 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 YIPF3Q9GZM5 350 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 TMEM126AQ9H061 195 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 CST9LQ9H4G1 147 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 TAS2R4Q9NYW5 299 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 OR52A1Q9UKL2 312 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 TRPM7Q96QT4 1865 aa1.89□□□□□ -2.11
TRAPPC13-208ENST00000505553 PAPPA2Q9BXP8 1791 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 SCN11AQ9UI33 1791 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 KIAA0100Q14667 2235 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 FER1L6Q2WGJ9 1857 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF106Q9H2Y7 1883 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 OR2T1O43869 369 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 DYNLT3P51808 116 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 RAB4BP61018 213 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 SURF2Q15527 256 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 RTL8BQ17RB0 113 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 C1orf140Q5VVS0 124 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 ZNF826PQ6ZT77 177 aa1.88□□□□□ -2.11
TRAPPC13-208ENST00000505553 SLC30A7Q8NEW0 376 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms