RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 SPATA25Q9BR10 227 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 SLC25A2Q9BXI2 301 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 CYTL1Q9NRR1 136 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 A0A0D9SG52 128 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 RHOBP62745 196 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 AKAP14Q86UN6 197 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-228ENST00000498814 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
CPNE1-228ENST00000498814 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-228ENST00000498814 ZNF331Q9NQX6 463 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-228ENST00000498814 H3BMM0 161 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
CPNE1-228ENST00000498814 HIST1H1EP10412 219 aaKnown RBP11.44□□□□□ -0.58
CPNE1-228ENST00000498814 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 Q6ZWC4 215 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 ARPC5LQ9BPX5 153 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 SH3BGRL3Q9H299 93 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 ZNF586Q9NXT0 402 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 U3KQK5 164 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
CPNE1-228ENST00000498814 A0A1B0GVG6 124 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 ZNF253O75346 499 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 MBP02144 154 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 PYYP10082 97 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 DEFB1P60022 68 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 RAB2AP61019 212 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 PSG3Q16557 428 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-228ENST00000498814 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 STAB2Q8WWQ8 2551 aa11.43□□□□□ -0.58
CPNE1-228ENST00000498814 TRBV19A0A075B6N1 114 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 A0A0J9YX75 114 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 H3BTX0 84 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 SLC17A3O00476 420 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 C1QBP02746 253 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 SPP1P10451 314 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 TAS2R45P59539 299 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 PDE6HQ13956 83 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 PAXXQ9BUH6 204 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
CPNE1-228ENST00000498814 HUWE1Q7Z6Z7 4374 aaKnown RBP11.42□□□□□ -0.58
CPNE1-228ENST00000498814 KANTRA0A1W2PQU2 76 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 F6UB75 175 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 BCL2L11O43521 198 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 OR7C2O60412 319 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 NBEAP1P0C6P0 100 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 HLA-DMBP28068 263 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 TMUB2Q71RG4 321 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
CPNE1-228ENST00000498814 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 RNF141Q8WVD5 230 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 RETNQ9HD89 108 aa11.41□□□□□ -0.58
CPNE1-228ENST00000498814 NDUFB4O95168 129 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 CA1P00915 261 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-228ENST00000498814 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
CPNE1-228ENST00000498814 PSG9Q00887 426 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 RNF183Q96D59 192 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 HYLS1Q96M11 299 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 OVOL2Q9BRP0 275 aa11.4□□□□□ -0.58
CPNE1-228ENST00000498814 A8MTW9 85 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 SPRY2O43597 315 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 DUSP14O95147 198 aaKnown RBP11.39□□□□□ -0.59
CPNE1-228ENST00000498814 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-228ENST00000498814 OR10J4P0C629 311 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-228ENST00000498814 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 LGALSLQ3ZCW2 172 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-228ENST00000498814 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 BLNKQ8WV28 456 aa11.39□□□□□ -0.59
CPNE1-228ENST00000498814 RPUSD4Q96CM3 377 aaKnown RBP11.39□□□□□ -0.59
CPNE1-228ENST00000498814 PFDN1O60925 122 aa11.38□□□□□ -0.59
CPNE1-228ENST00000498814 C4BPBP20851 252 aa11.38□□□□□ -0.59
CPNE1-228ENST00000498814 EIF5AP63241 154 aaKnown RBP11.38□□□□□ -0.59
CPNE1-228ENST00000498814 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
CPNE1-228ENST00000498814 CD300CQ08708 224 aa11.38□□□□□ -0.59
CPNE1-228ENST00000498814 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
CPNE1-228ENST00000498814 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms