RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MGST2Q99735 147 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 NIPSNAP3BQ9BS92 247 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 NDUFA13Q9P0J0 144 aa10.15□□□□□ -0.78
VTI1A-209ENST00000496445 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
VTI1A-209ENST00000496445 RRN3P1Q2M238 152 aa10.14□□□□□ -0.79
VTI1A-209ENST00000496445 ZNF546Q86UE3 836 aa10.14□□□□□ -0.79
VTI1A-209ENST00000496445 ZNF431Q8TF32 576 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-209ENST00000496445 GGACTQ9BVM4 153 aa10.14□□□□□ -0.79
VTI1A-209ENST00000496445 LSM5Q9Y4Y9 91 aaKnown RBP10.14□□□□□ -0.79
VTI1A-209ENST00000496445 TRAV12-2A0A075B6T6 113 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 FAM25EA8MYX2 175 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 BOLA2-SMG1P6H3BVE0 249 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-209ENST00000496445 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-209ENST00000496445 OXA1LQ15070 435 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 PSG3Q16557 428 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 LINC00305Q7Z4B0 112 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 POM121L12Q8N7R1 296 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 TMEM37Q8WXS4 190 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 CCDC32Q9BV29 185 aa10.13□□□□□ -0.79
VTI1A-209ENST00000496445 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 ZNF705GA8MUZ8 300 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-209ENST00000496445 L7N2F9 121 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 GOSR2O14653 212 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 SNRPCP09234 159 aaKnown RBP10.12□□□□□ -0.79
VTI1A-209ENST00000496445 P0DMU3 169 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 VAMP2P63027 116 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 ZNF846Q147U1 533 aa10.12□□□□□ -0.79
VTI1A-209ENST00000496445 C12orf45Q8N5I9 185 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-209ENST00000496445 C5orf51A6NDU8 294 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 FAM24AA6NFZ4 105 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 SLC17A3O00476 420 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 COX7A2P2O60397 106 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 CST7O76096 145 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 HTN3P15516 51 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 CXCL2P19875 107 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 CAV2P51636 162 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 OPCMLQ14982 345 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 LCN15Q6UWW0 184 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 S100A7AQ86SG5 101 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 RPUSD4Q96CM3 377 aaKnown RBP10.11□□□□□ -0.79
VTI1A-209ENST00000496445 C2orf50Q96LR7 162 aa10.11□□□□□ -0.79
VTI1A-209ENST00000496445 ZNF331Q9NQX6 463 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-209ENST00000496445 H3BTX0 84 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 IGLC2P0DOY2 106 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 AZU1P20160 251 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 CAMLGP49069 296 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 BCAP31P51572 246 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 DAD1P61803 113 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 IL15RAQ13261 267 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 TMEM88Q6PEY1 159 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 NRARPQ7Z6K4 114 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 FAM210BQ96KR6 192 aa10.1□□□□□ -0.79
VTI1A-209ENST00000496445 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-209ENST00000496445 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 TSPOP30536 169 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 S100A10P60903 97 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 RHOBP62745 196 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 RAB32Q13637 225 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 C10orf113Q5VZT2 155 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 UQCC1Q9NVA1 299 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 RNF24Q9Y225 148 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 WDR83OSQ9Y284 106 aa10.09□□□□□ -0.79
VTI1A-209ENST00000496445 TRAV5A0A0B4J249 113 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 FAM240BA0A1B0GVZ2 78 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 H3BQ15 152 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 SULT1A1P50225 295 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
VTI1A-209ENST00000496445 PARD6GQ9BYG4 376 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-209ENST00000496445 CDKN1BP46527 198 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 B2MP61769 119 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 ASAH1Q13510 395 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 LINC00299Q6ZSB3 139 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 TMEM252Q8N6L7 170 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 SAT2Q96F10 170 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-209ENST00000496445 LINC01587Q99440 93 aa10.07□□□□□ -0.8
VTI1A-209ENST00000496445 RYR1P21817 5038 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 A0A1B0GVY2 172 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 M0R2N4 97 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 RTL8CO15255 209 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
VTI1A-209ENST00000496445 TAS2R60P59551 318 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 RAB31Q13636 194 aa10.06□□□□□ -0.8
VTI1A-209ENST00000496445 FCN2Q15485 313 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms