RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 GIPP09681 153 aaPredicted RBP11.63□□□□□ -0.55
LIME1-209ENST00000494776 FXYD7P58549 80 aa11.63□□□□□ -0.55
LIME1-209ENST00000494776 FAM78BQ5VT40 261 aa11.63□□□□□ -0.55
LIME1-209ENST00000494776 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
LIME1-209ENST00000494776 ASB13Q8WXK3 278 aa11.63□□□□□ -0.55
LIME1-209ENST00000494776 AGRNO00468 2067 aa11.63□□□□□ -0.55
LIME1-209ENST00000494776 MRPS12O15235 138 aaKnown RBP11.62□□□□□ -0.55
LIME1-209ENST00000494776 CXCL2P19875 107 aa11.62□□□□□ -0.55
LIME1-209ENST00000494776 PSG9Q00887 426 aa11.62□□□□□ -0.55
LIME1-209ENST00000494776 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
LIME1-209ENST00000494776 H3BTX0 84 aa11.61□□□□□ -0.55
LIME1-209ENST00000494776 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
LIME1-209ENST00000494776 PSG3Q16557 428 aa11.61□□□□□ -0.55
LIME1-209ENST00000494776 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
LIME1-209ENST00000494776 CLUHP3Q96NS8 147 aa11.61□□□□□ -0.55
LIME1-209ENST00000494776 HRH4Q9H3N8 390 aa11.61□□□□□ -0.55
LIME1-209ENST00000494776 HLA-DMBP28068 263 aa11.6□□□□□ -0.55
LIME1-209ENST00000494776 GUK1Q16774 197 aa11.6□□□□□ -0.55
LIME1-209ENST00000494776 MFFQ9GZY8 342 aa11.6□□□□□ -0.55
LIME1-209ENST00000494776 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
LIME1-209ENST00000494776 PPP1R14DQ9NXH3 145 aa11.6□□□□□ -0.55
LIME1-209ENST00000494776 H3BQ15 152 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 DEFB4AO15263 64 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 ZNF705DP0CH99 300 aaPredicted RBP11.59□□□□□ -0.55
LIME1-209ENST00000494776 ZNF705BP0CI00 300 aaPredicted RBP11.59□□□□□ -0.55
LIME1-209ENST00000494776 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
LIME1-209ENST00000494776 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
LIME1-209ENST00000494776 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
LIME1-209ENST00000494776 CSNK1G2-AS1Q8NCQ2 148 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 SLC35B3Q9H1N7 401 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
LIME1-209ENST00000494776 DNAH7Q8WXX0 4024 aa11.58□□□□□ -0.55
LIME1-209ENST00000494776 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 FXYD6-FXYD2A0A087WZ82 144 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 SLC17A3O00476 420 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 MIFP14174 115 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 RHOBP62745 196 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 Q5BKY6 102 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
LIME1-209ENST00000494776 AQP10Q96PS8 301 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 MRPL32Q9BYC8 188 aaKnown RBP11.58□□□□□ -0.56
LIME1-209ENST00000494776 PARD6GQ9BYG4 376 aaPredicted RBP11.58□□□□□ -0.56
LIME1-209ENST00000494776 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
LIME1-209ENST00000494776 TMEM14CQ9P0S9 112 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
LIME1-209ENST00000494776 ZNF705EA8MWA4 302 aaPredicted RBP11.57□□□□□ -0.56
LIME1-209ENST00000494776 PRB4P10163 310 aaPredicted RBP11.57□□□□□ -0.56
LIME1-209ENST00000494776 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
LIME1-209ENST00000494776 ZNF266Q14584 549 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 OR8A1Q8NGG7 326 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 BLNKQ8WV28 456 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 SAT2Q96F10 170 aaPredicted RBP11.57□□□□□ -0.56
LIME1-209ENST00000494776 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 FUT9Q9Y231 359 aa11.57□□□□□ -0.56
LIME1-209ENST00000494776 IGHV4-28A0A0C4DH34 117 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
LIME1-209ENST00000494776 PYYP10082 97 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 Q8NAQ8 132 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 C11orf45Q8TAV5 145 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 GOLT1BQ9Y3E0 138 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 X6R8D5 127 aa11.56□□□□□ -0.56
LIME1-209ENST00000494776 TRBV19A0A075B6N1 114 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 OR7C2O60412 319 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 ZNF253O75346 499 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 AMBPP02760 352 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 ACOT6Q3I5F7 207 aaPredicted RBP11.55□□□□□ -0.56
LIME1-209ENST00000494776 OR10J6PQ8NGY7 276 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 TMEM208Q9BTX3 173 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 PAXXQ9BUH6 204 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 RYR3Q15413 4870 aa11.55□□□□□ -0.56
LIME1-209ENST00000494776 A8MTW9 85 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 M0R2Z0 102 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 PDE6HQ13956 83 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 HSD17B11Q8NBQ5 300 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 RFNGQ9Y644 331 aa11.54□□□□□ -0.56
LIME1-209ENST00000494776 A0A1W2PPV4 95 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 OR10J4P0C629 311 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
LIME1-209ENST00000494776 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 TAS2R45P59539 299 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
LIME1-209ENST00000494776 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
LIME1-209ENST00000494776 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
LIME1-209ENST00000494776 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 FAM167A-AS1Q96KT0 104 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 IGF2BP2-AS1Q96M15 143 aa11.53□□□□□ -0.56
LIME1-209ENST00000494776 TNFSF18Q9UNG2 199 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms