RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PPT1P50897 306 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 LCN15Q6UWW0 184 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 SLC50A1Q9BRV3 221 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 MGAM2Q2M2H8 2515 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 ZNF705EA8MWA4 302 aaPredicted RBP9.35□□□□□ -0.91
SNX17-208ENST00000493711 ISLRO14498 428 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
SNX17-208ENST00000493711 NBEAP1P0C6P0 100 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 IGLC2P0DOY2 106 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
SNX17-208ENST00000493711 PSG9Q00887 426 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 ZNF680Q8NEM1 530 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
SNX17-208ENST00000493711 TRBV19A0A075B6N1 114 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 GCHFRP30047 84 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 PSMB3P49720 205 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 FHITP49789 147 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
SNX17-208ENST00000493711 ZNF726P1Q15940 193 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
SNX17-208ENST00000493711 K7EQG2 157 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 PYYP10082 97 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 BEAN1Q3B7T3 259 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 FAM74A1Q5RGS3 127 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 GTSCR1Q86UQ5 136 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 FXYD5Q96DB9 178 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
SNX17-208ENST00000493711 PRELID1Q9Y255 219 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
SNX17-208ENST00000493711 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
SNX17-208ENST00000493711 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 H3BQ15 152 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
SNX17-208ENST00000493711 OR10J4P0C629 311 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
SNX17-208ENST00000493711 RAB14P61106 215 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 ZNF586Q9NXT0 402 aa9.32□□□□□ -0.92
SNX17-208ENST00000493711 IZUMO1RA6ND01 250 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 IFNA1P01562 189 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 TFPI2P48307 235 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 SSX7Q7RTT5 188 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
SNX17-208ENST00000493711 MRPL53Q96EL3 112 aaKnown RBP9.31□□□□□ -0.92
SNX17-208ENST00000493711 ZNF331Q9NQX6 463 aaPredicted RBP9.31□□□□□ -0.92
SNX17-208ENST00000493711 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 SOCS3O14543 225 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
SNX17-208ENST00000493711 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
SNX17-208ENST00000493711 RXFP4Q8TDU9 374 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 BLNKQ8WV28 456 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 TXNDC17Q9BRA2 123 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 TCEAL7Q9BRU2 100 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 MANBALQ9NQG1 85 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
SNX17-208ENST00000493711 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 CSN1S1P47710 185 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 PSG3Q16557 428 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 C17orf77Q96MU5 243 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 SELENOKQ9Y6D0 94 aa9.29□□□□□ -0.92
SNX17-208ENST00000493711 G3V4G9 280 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 EIF3GO75821 320 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX17-208ENST00000493711 NDUFB4O95168 129 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 CD81P60033 236 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 RANP62826 216 aaKnown RBP9.28□□□□□ -0.92
SNX17-208ENST00000493711 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 LINC00052Q96N35 136 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 Q9H3A6 140 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 VWFP04275 2813 aa9.28□□□□□ -0.92
SNX17-208ENST00000493711 TRAV8-2A0A0B4J237 113 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 H3BTX0 84 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 SLC17A3O00476 420 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 ZNF688P0C7X2 276 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 IFITM2Q01629 132 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 ICAM4Q14773 271 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 PSMG4Q5JS54 123 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 EBLN2Q6P2I7 272 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms