RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 TMEM189A5PLL7 270 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 MRPS12O15235 138 aaKnown RBP17.37■□□□□ 0.37
PTPN18-213ENST00000489215 RBMY1A1P0DJD3 496 aaKnown RBP17.37■□□□□ 0.37
PTPN18-213ENST00000489215 RBMY1CP0DJD4 496 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 CXCL3P19876 107 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 H2BFSP57053 126 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 NANOS2P60321 138 aaKnown RBP17.37■□□□□ 0.37
PTPN18-213ENST00000489215 OPCMLQ14982 345 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 RBMY1FQ15415 496 aaKnown RBP17.37■□□□□ 0.37
PTPN18-213ENST00000489215 GUK1Q16774 197 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 ZNF709Q8N972 641 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 OR5C1Q8NGR4 320 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 PPP1R1CQ8WVI7 109 aa17.37■□□□□ 0.37
PTPN18-213ENST00000489215 PTTG1O95997 202 aa17.36■□□□□ 0.37
PTPN18-213ENST00000489215 NHLH2Q02577 135 aa17.36■□□□□ 0.37
PTPN18-213ENST00000489215 PSG3Q16557 428 aa17.36■□□□□ 0.37
PTPN18-213ENST00000489215 KCNIP2Q9NS61 270 aa17.36■□□□□ 0.37
PTPN18-213ENST00000489215 OR5AC2Q9NZP5 309 aa17.36■□□□□ 0.37
PTPN18-213ENST00000489215 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
PTPN18-213ENST00000489215 ZNF705DP0CH99 300 aaPredicted RBP17.35■□□□□ 0.37
PTPN18-213ENST00000489215 ZNF705BP0CI00 300 aaPredicted RBP17.35■□□□□ 0.37
PTPN18-213ENST00000489215 TCTAP57738 103 aa17.35■□□□□ 0.37
PTPN18-213ENST00000489215 RNF182Q8N6D2 247 aa17.35■□□□□ 0.37
PTPN18-213ENST00000489215 SLC35B3Q9H1N7 401 aa17.35■□□□□ 0.37
PTPN18-213ENST00000489215 PXMP4Q9Y6I8 212 aa17.35■□□□□ 0.37
PTPN18-213ENST00000489215 STARD9Q9P2P6 4700 aa17.34■□□□□ 0.37
PTPN18-213ENST00000489215 CNN1P51911 297 aaKnown RBP17.34■□□□□ 0.37
PTPN18-213ENST00000489215 FXYD7P58549 80 aa17.34■□□□□ 0.37
PTPN18-213ENST00000489215 IGFL4Q6B9Z1 124 aa17.34■□□□□ 0.37
PTPN18-213ENST00000489215 NPCDR1Q9BY65 106 aa17.34■□□□□ 0.37
PTPN18-213ENST00000489215 ZNF331Q9NQX6 463 aaPredicted RBP17.34■□□□□ 0.37
PTPN18-213ENST00000489215 H0YIZ8 118 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 MPC2O95563 127 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 C2CD4CQ8TF44 421 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 IGF2BP2-AS1Q96M15 143 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 PPP1R14DQ9NXH3 145 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 RFNGQ9Y644 331 aa17.33■□□□□ 0.36
PTPN18-213ENST00000489215 TEX48A0A1B0GUV7 120 aa17.32■□□□□ 0.36
PTPN18-213ENST00000489215 AMTNQ6UX39 209 aa17.32■□□□□ 0.36
PTPN18-213ENST00000489215 OR8A1Q8NGG7 326 aa17.32■□□□□ 0.36
PTPN18-213ENST00000489215 IGHV3OR16-12A0A075B7B8 117 aa17.31■□□□□ 0.36
PTPN18-213ENST00000489215 C17orf112F2Z3M2 114 aa17.31■□□□□ 0.36
PTPN18-213ENST00000489215 HBE1P02100 147 aa17.31■□□□□ 0.36
PTPN18-213ENST00000489215 IGLC2P0DOY2 106 aa17.31■□□□□ 0.36
PTPN18-213ENST00000489215 OR11H7Q8NGC8 314 aa17.31■□□□□ 0.36
PTPN18-213ENST00000489215 RPUSD4Q96CM3 377 aaKnown RBP17.31■□□□□ 0.36
PTPN18-213ENST00000489215 ZNF253O75346 499 aa17.3■□□□□ 0.36
PTPN18-213ENST00000489215 HLA-DMBP28068 263 aa17.3■□□□□ 0.36
PTPN18-213ENST00000489215 RHOBP62745 196 aa17.3■□□□□ 0.36
PTPN18-213ENST00000489215 TMEM208Q9BTX3 173 aa17.3■□□□□ 0.36
PTPN18-213ENST00000489215 RNF126Q9BV68 326 aa17.3■□□□□ 0.36
PTPN18-213ENST00000489215 TRAV10A0A0B4J240 114 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 SPART-AS1P0CW21 52 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 HIST1H1AQ02539 215 aaPredicted RBP17.29■□□□□ 0.36
PTPN18-213ENST00000489215 CLINT1Q14677 625 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 MORN5Q5VZ52 161 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 THAP6Q8TBB0 222 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 LINC00476Q8WZB0 136 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 WDR61Q9GZS3 305 aaKnown RBP17.29■□□□□ 0.36
PTPN18-213ENST00000489215 TMEM14CQ9P0S9 112 aa17.29■□□□□ 0.36
PTPN18-213ENST00000489215 INSP01308 110 aa17.28■□□□□ 0.36
PTPN18-213ENST00000489215 RRN3P1Q2M238 152 aa17.28■□□□□ 0.36
PTPN18-213ENST00000489215 SAT2Q96F10 170 aaPredicted RBP17.28■□□□□ 0.36
PTPN18-213ENST00000489215 ATP5SQ99766 215 aa17.28■□□□□ 0.36
PTPN18-213ENST00000489215 HSPB11Q9Y547 144 aa17.28■□□□□ 0.36
PTPN18-213ENST00000489215 BOLA2-SMG1P6H3BVE0 249 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 LY6G6CO95867 125 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 RPL12P30050 165 aaKnown RBP17.27■□□□□ 0.36
PTPN18-213ENST00000489215 SPINK13Q1W4C9 94 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 C1orf158Q8N1D5 194 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 OR10J6PQ8NGY7 276 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 ALG5Q9Y673 324 aa17.27■□□□□ 0.36
PTPN18-213ENST00000489215 TRAV5A0A0B4J249 113 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 IFNA5P01569 189 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 HIST1H1EP10412 219 aaKnown RBP17.26■□□□□ 0.35
PTPN18-213ENST00000489215 PDE6HQ13956 83 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 TMEM256Q8N2U0 113 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 SCGB1C1Q8TD33 95 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 RYR3Q15413 4870 aa17.26■□□□□ 0.35
PTPN18-213ENST00000489215 H3BQ15 152 aa17.25■□□□□ 0.35
PTPN18-213ENST00000489215 MRPL32Q9BYC8 188 aaKnown RBP17.25■□□□□ 0.35
PTPN18-213ENST00000489215 MED28Q9H204 178 aa17.25■□□□□ 0.35
PTPN18-213ENST00000489215 PRELID1Q9Y255 219 aa17.25■□□□□ 0.35
PTPN18-213ENST00000489215 DYNC2H1Q8NCM8 4307 aaKnown RBP17.25■□□□□ 0.35
PTPN18-213ENST00000489215 M0R2Z0 102 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 TSPOP30536 169 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 CDKN1BP46527 198 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 Q6ZTC4 211 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 MRPL53Q96EL3 112 aaKnown RBP17.24■□□□□ 0.35
PTPN18-213ENST00000489215 MBD2Q9UBB5 411 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 TIMM9Q9Y5J7 89 aa17.24■□□□□ 0.35
PTPN18-213ENST00000489215 TRBV19A0A075B6N1 114 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 LOC102723971A0A1B0GUV8 181 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 SLC17A3O00476 420 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 CRXO43186 299 aaPredicted RBP17.23■□□□□ 0.35
PTPN18-213ENST00000489215 SNRPCP09234 159 aaKnown RBP17.23■□□□□ 0.35
PTPN18-213ENST00000489215 C12orf74Q32Q52 190 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 LGALS9CQ6DKI2 356 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 ASB13Q8WXK3 278 aa17.23■□□□□ 0.35
PTPN18-213ENST00000489215 ZNF586Q9NXT0 402 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms