RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 TSSC4Q9Y5U2 329 aaPredicted RBP3□□□□□ -1.93
SRRM1-215ENST00000488317 CHCHD2Q9Y6H1 151 aaPredicted RBP3□□□□□ -1.93
SRRM1-215ENST00000488317 LY96Q9Y6Y9 160 aa3□□□□□ -1.93
SRRM1-215ENST00000488317 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
SRRM1-215ENST00000488317 FAM186AA6NE01 2351 aa3□□□□□ -1.93
SRRM1-215ENST00000488317 IGHV1OR15-9A0A0B4J2B8 117 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1-6A0A0C4DH72 117 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 UBE2L5PA0A1B0GUS4 154 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TRAPPC2LH3BP13 241 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 NDUFS8O00217 210 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 APCSP02743 223 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 MT-ND6P03923 174 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF32P17041 273 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 GZMHP20718 246 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 IL3RAP26951 378 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 YPEL3P61236 119 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-215ENST00000488317 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 DEFB133Q30KQ1 61 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 CEACAM21Q3KPI0 293 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 MPV17L2Q567V2 206 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TMEM31Q5JXX7 168 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 COL5A1-AS1Q5SY13 56 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 FBXW9Q5XUX1 488 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TOMM20LQ6UXN7 152 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 SSX7Q7RTT5 188 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 RPS19BP1Q86WX3 136 aaKnown RBP2.99□□□□□ -1.93
SRRM1-215ENST00000488317 Q8IYB0 196 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF709Q8N972 641 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 ZIC4Q8N9L1 334 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TSTD1Q8NFU3 115 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 OR5A2Q8NGI9 324 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 CMTM2Q8TAZ6 248 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 PSMF1Q92530 271 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 APOBEC3DQ96AK3 386 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-215ENST00000488317 OR4C12Q96R67 309 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TMEM208Q9BTX3 173 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 LINC00470Q9BZP3 86 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF355PQ9NSJ1 428 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 TMEM106BQ9NUM4 274 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 MPC1Q9Y5U8 109 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 RFNGQ9Y644 331 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 PXMP4Q9Y6I8 212 aa2.99□□□□□ -1.93
SRRM1-215ENST00000488317 BRCA2P51587 3418 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 A0A0J9YW62 118 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 MDFIC2A0A1B0GVS7 189 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 TMEM223A0PJW6 202 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 C20orf202A1L168 122 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 H3BP45 60 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 J3QT63 122 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 YPEL1O60688 119 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 CBR3O75828 277 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 KRASP01116 189 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1-39P01597 117 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1-5P01602 117 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1D-39P04432 117 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 REG1AP05451 166 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 MMP7P09237 267 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 SCTP09683 121 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 OR4A8P0C604 315 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF25P17030 456 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 CDC34P49427 236 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 PSG4Q00888 419 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 LOXL1Q08397 574 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 Q0VG73 95 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 CATR1Q13166 79 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 C16orf47Q6ZP98 133 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 AAED1Q7RTV5 226 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 MDP1Q86V88 176 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 RPP25LQ8N5L8 163 aaKnown RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 OR10P1Q8NGE3 313 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 OR51H1Q8NH63 302 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 NEK7Q8TDX7 302 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 STARD4Q96DR4 205 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 SFRP2Q96HF1 295 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF488Q96MN9 340 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 YPEL2Q96QA6 119 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 TMEM243Q9BU79 118 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 VAMP8Q9BV40 100 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 NPCDR1Q9BY65 106 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 VSIRQ9H7M9 311 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 CBLN4Q9NTU7 201 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF586Q9NXT0 402 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 ZFP30Q9Y2G7 519 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 TRAPPC1Q9Y5R8 145 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 PCNX2A6NKB5 2137 aa2.98□□□□□ -1.93
SRRM1-215ENST00000488317 HEATR1Q9H583 2144 aaKnown RBP2.98□□□□□ -1.93
SRRM1-215ENST00000488317 COL27A1Q8IZC6 1860 aaPredicted RBP2.97□□□□□ -1.93
SRRM1-215ENST00000488317 IGHV1-45A0A0A0MS14 117 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 C9JCJ5 164 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 CXorf1O96002 111 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 MT-CO2P00403 227 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1D-33P01593 117 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 IGKV1-33P01594 117 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 OR10J4P0C629 311 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 ZNF688P0C7X2 276 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 IAPPP10997 89 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 ARR3P36575 388 aa2.97□□□□□ -1.93
SRRM1-215ENST00000488317 OPRK1P41145 380 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms