RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NRN1Q9NPD7 142 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 MANBALQ9NQG1 85 aa8.37□□□□□ -1.07
HDLBP-242ENST00000488013 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
HDLBP-242ENST00000488013 IGHV3-49A0A0A0MS15 119 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 DNASE2O00115 360 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-242ENST00000488013 TSPAN4O14817 238 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-242ENST00000488013 FAM90A2PQ658T7 463 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 LEMD1Q68G75 181 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 IQCF2Q8IXL9 164 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 SPAG8Q99932 426 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-242ENST00000488013 AAMDCQ9H7C9 122 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 MLXQ9UH92 298 aa8.36□□□□□ -1.07
HDLBP-242ENST00000488013 TRBV19A0A075B6N1 114 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 IGHV3OR16-13A0A075B7E8 117 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 IGHV3-74A0A0B4J1X5 117 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 ISLRO14498 428 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 MRPS12O15235 138 aaKnown RBP8.35□□□□□ -1.07
HDLBP-242ENST00000488013 HMGB3O15347 200 aaKnown RBP8.35□□□□□ -1.07
HDLBP-242ENST00000488013 NDUFS6O75380 124 aaKnown RBP8.35□□□□□ -1.07
HDLBP-242ENST00000488013 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
HDLBP-242ENST00000488013 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 RXFP4Q8TDU9 374 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 SMDT1Q9H4I9 107 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 PRELID1Q9Y255 219 aa8.35□□□□□ -1.07
HDLBP-242ENST00000488013 OR10J4P0C629 311 aa8.34□□□□□ -1.07
HDLBP-242ENST00000488013 CD300EQ496F6 205 aaPredicted RBP8.34□□□□□ -1.07
HDLBP-242ENST00000488013 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
HDLBP-242ENST00000488013 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
HDLBP-242ENST00000488013 F6UZH7 168 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 PYYP10082 97 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 CSN1S1P47710 185 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 FGF8P55075 233 aaPredicted RBP8.33□□□□□ -1.08
HDLBP-242ENST00000488013 ADAMTSL5Q6ZMM2 481 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 SSX7Q7RTT5 188 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 CMTM2Q8TAZ6 248 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
HDLBP-242ENST00000488013 C16orf92Q96LL3 132 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 MS4A6AQ9H2W1 248 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
HDLBP-242ENST00000488013 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 ZNF586Q9NXT0 402 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 VAX2Q9UIW0 290 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 WNK1Q9H4A3 2382 aa8.33□□□□□ -1.08
HDLBP-242ENST00000488013 SERTM2A0A1B0GWG4 89 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 H3BQ15 152 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 BCL2P10415 239 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 RANP62826 216 aaKnown RBP8.32□□□□□ -1.08
HDLBP-242ENST00000488013 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 TMEM61Q8N0U2 210 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 BLNKQ8WV28 456 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 RPUSD4Q96CM3 377 aaKnown RBP8.32□□□□□ -1.08
HDLBP-242ENST00000488013 FAM110AQ9BQ89 295 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 SMAD5-AS1Q9Y6J3 95 aa8.32□□□□□ -1.08
HDLBP-242ENST00000488013 A0A1B0GV50 99 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 RAB19A4D1S5 217 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 FBLL1A6NHQ2 334 aaKnown RBP8.31□□□□□ -1.08
HDLBP-242ENST00000488013 K7EQM0 130 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 PDE6DO43924 150 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 PEA15Q15121 130 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 GUCA2BQ16661 112 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 CST9LP1Q5W188 147 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 HIST1H2BAQ96A08 127 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 EIF5A2Q9GZV4 153 aaKnown RBP8.31□□□□□ -1.08
HDLBP-242ENST00000488013 Q9H3A6 140 aa8.31□□□□□ -1.08
HDLBP-242ENST00000488013 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 FAM74A7A6NL05 159 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 K7EQG2 157 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 SOCS3O14543 225 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 PAGE4O60829 102 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 NDUFB4O95168 129 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 CCL20P78556 96 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-242ENST00000488013 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 TMPRSS5Q9H3S3 457 aa8.3□□□□□ -1.08
HDLBP-242ENST00000488013 TENM1Q9UKZ4 2725 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 PGPA6NDG6 321 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDLBP-242ENST00000488013 S100A9P06702 114 aaKnown RBP8.29□□□□□ -1.08
HDLBP-242ENST00000488013 EDN2P20800 178 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
HDLBP-242ENST00000488013 PSG3Q16557 428 aa8.29□□□□□ -1.08
HDLBP-242ENST00000488013 ZNF506Q5JVG8 444 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms