RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 MIC13Q5XKP0 118 aa16.94■□□□□ 0.3
RHBDF1-208ENST00000482904 ZNF767PQ75MW2 155 aa16.94■□□□□ 0.3
RHBDF1-208ENST00000482904 BPIFA4PQ86YQ2 179 aa16.94■□□□□ 0.3
RHBDF1-208ENST00000482904 TMEM208Q9BTX3 173 aa16.94■□□□□ 0.3
RHBDF1-208ENST00000482904 WDR83OSQ9Y284 106 aa16.94■□□□□ 0.3
RHBDF1-208ENST00000482904 SIX6O95475 246 aa16.93■□□□□ 0.3
RHBDF1-208ENST00000482904 CXCL3P19876 107 aa16.93■□□□□ 0.3
RHBDF1-208ENST00000482904 LRRC37A5PQ49AS3 106 aa16.93■□□□□ 0.3
RHBDF1-208ENST00000482904 LCN15Q6UWW0 184 aa16.93■□□□□ 0.3
RHBDF1-208ENST00000482904 HBE1P02100 147 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 AMBPP02760 352 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 RLN2P04090 185 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 CXCL2P19875 107 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 TCTAP57738 103 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 HIST1H1AQ02539 215 aaPredicted RBP16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 VWC2Q2TAL6 325 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 OR1L4Q8NGR5 311 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 TMEM37Q8WXS4 190 aa16.92■□□□□ 0.3
RHBDF1-208ENST00000482904 A8MTW9 85 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 MRPS12O15235 138 aaKnown RBP16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 INSP01308 110 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 SNRPCP09234 159 aaKnown RBP16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 FGF7P21781 194 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 OPCMLQ14982 345 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 SPINK13Q1W4C9 94 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 LGALS9CQ6DKI2 356 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 AMTNQ6UX39 209 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 OR11H7Q8NGC8 314 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 IGF2BP2-AS1Q96M15 143 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 PFDN5Q99471 154 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 SLC50A1Q9BRV3 221 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 PPP1R14DQ9NXH3 145 aa16.91■□□□□ 0.3
RHBDF1-208ENST00000482904 M0R2Z0 102 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 B2MP61769 119 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 RHOBP62745 196 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PRR20EP86478 221 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PRR20CP86479 221 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PRR20DP86480 221 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PRR20BP86481 221 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PRR20AP86496 221 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 PSG3Q16557 428 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 ATP6V1FQ16864 119 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 C12orf74Q32Q52 190 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 C1orf158Q8N1D5 194 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 NMES1Q9C002 83 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 DNAJC4Q9NNZ3 241 aa16.9■□□□□ 0.3
RHBDF1-208ENST00000482904 LOC102723971A0A1B0GUV8 181 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 BOLA2-SMG1P6H3BVE0 249 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 SPART-AS1P0CW21 52 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 RRN3P1Q2M238 152 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 MORN5Q5VZ52 161 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 OR8A1Q8NGG7 326 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 RPUSD4Q96CM3 377 aaKnown RBP16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 SLC39A9Q9NUM3 307 aa16.89■□□□□ 0.29
RHBDF1-208ENST00000482904 DEFB131BA0A096LNP1 70 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 TEX48A0A1B0GUV7 120 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 E5RGE8 158 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 H3BTX0 84 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 SSNA1O43805 119 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 RPL29P47914 159 aaKnown RBP16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 SLC25A31Q9H0C2 315 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 ZNF331Q9NQX6 463 aaPredicted RBP16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 PXMP4Q9Y6I8 212 aa16.88■□□□□ 0.29
RHBDF1-208ENST00000482904 PRB4P10163 310 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-208ENST00000482904 CYCSP99999 105 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-208ENST00000482904 BAP18Q8IXM2 172 aa16.87■□□□□ 0.29
RHBDF1-208ENST00000482904 MARVELD1Q9BSK0 173 aa16.87■□□□□ 0.29
RHBDF1-208ENST00000482904 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
RHBDF1-208ENST00000482904 IGHV4-4A0A075B6R2 117 aa16.86■□□□□ 0.29
RHBDF1-208ENST00000482904 OR5C1Q8NGR4 320 aa16.86■□□□□ 0.29
RHBDF1-208ENST00000482904 SLC17A3O00476 420 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 MPDU1O75352 247 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 NHLH2Q02577 135 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 FAM222AQ5U5X8 452 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 RPP25LQ8N5L8 163 aaKnown RBP16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 THAP6Q8TBB0 222 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 RNF126Q9BV68 326 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 NPCDR1Q9BY65 106 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 YTHDF2Q9Y5A9 579 aaKnown RBP16.85■□□□□ 0.29
RHBDF1-208ENST00000482904 TRAV12-2A0A075B6T6 113 aa16.84■□□□□ 0.29
RHBDF1-208ENST00000482904 TRAV5A0A0B4J249 113 aa16.84■□□□□ 0.29
RHBDF1-208ENST00000482904 IGLC2P0DOY2 106 aa16.84■□□□□ 0.29
RHBDF1-208ENST00000482904 CLINT1Q14677 625 aa16.84■□□□□ 0.29
RHBDF1-208ENST00000482904 DKK2Q9UBU2 259 aa16.84■□□□□ 0.29
RHBDF1-208ENST00000482904 CRXO43186 299 aaPredicted RBP16.83■□□□□ 0.28
RHBDF1-208ENST00000482904 GUK1Q16774 197 aa16.83■□□□□ 0.28
RHBDF1-208ENST00000482904 CHAC2Q8WUX2 184 aa16.83■□□□□ 0.28
RHBDF1-208ENST00000482904 H3BQ15 152 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 PET100P0DJ07 73 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 H2BFSP57053 126 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 OR10J6PQ8NGY7 276 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 PPP1R1CQ8WVI7 109 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 NIPSNAP3BQ9BS92 247 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 KCNIP2Q9NS61 270 aa16.82■□□□□ 0.28
RHBDF1-208ENST00000482904 ZNF705GA8MUZ8 300 aaPredicted RBP16.81■□□□□ 0.28
RHBDF1-208ENST00000482904 H0YIZ8 118 aa16.81■□□□□ 0.28
RHBDF1-208ENST00000482904 EPPK1P58107 5090 aaKnown RBP16.8■□□□□ 0.28
RHBDF1-208ENST00000482904 HTN3P15516 51 aa16.8■□□□□ 0.28
RHBDF1-208ENST00000482904 NDUFAF3Q9BU61 184 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms