RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KIR3DS1Q14943 382 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 Q6ZTI0 123 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 LYZL2Q7Z4W2 148 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 EXTL2Q9UBQ6 330 aa13.76□□□□□ -0.21
PDLIM1-202ENST00000477757 DISC1C4P0D8 188 aa13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 DAZ2Q13117 558 aaKnown RBP13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 GFI1BQ5VTD9 330 aa13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 RPUSD4Q96CM3 377 aaKnown RBP13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 KCNIP3Q9Y2W7 256 aa13.75□□□□□ -0.21
PDLIM1-202ENST00000477757 IAPPP10997 89 aa13.74□□□□□ -0.21
PDLIM1-202ENST00000477757 SSBP1Q04837 148 aaKnown RBP13.74□□□□□ -0.21
PDLIM1-202ENST00000477757 C15orf40Q8WUR7 153 aa13.74□□□□□ -0.21
PDLIM1-202ENST00000477757 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
PDLIM1-202ENST00000477757 MZT2AQ6P582 158 aa13.73□□□□□ -0.21
PDLIM1-202ENST00000477757 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
PDLIM1-202ENST00000477757 DNAH8Q96JB1 4490 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 PITX3O75364 302 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 RAP2BP61225 183 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 SRPXP78539 464 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 SERTAD4-AS1Q5TG53 156 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 LRRC20Q8TCA0 184 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 PARD6GQ9BYG4 376 aaPredicted RBP13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
PDLIM1-202ENST00000477757 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
PDLIM1-202ENST00000477757 VBP1P61758 197 aa13.71□□□□□ -0.21
PDLIM1-202ENST00000477757 PRRT1Q99946 306 aa13.71□□□□□ -0.21
PDLIM1-202ENST00000477757 LINC00467Q9BRT7 94 aa13.71□□□□□ -0.21
PDLIM1-202ENST00000477757 MSRB1Q9NZV6 116 aa13.71□□□□□ -0.21
PDLIM1-202ENST00000477757 TRAV9-2A0A087WT02 112 aa13.7□□□□□ -0.22
PDLIM1-202ENST00000477757 CXCL2P19875 107 aa13.7□□□□□ -0.22
PDLIM1-202ENST00000477757 SYT8Q8NBV8 401 aa13.7□□□□□ -0.22
PDLIM1-202ENST00000477757 AP3S1Q92572 193 aa13.7□□□□□ -0.22
PDLIM1-202ENST00000477757 HYPMO75409 117 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 PLP1P60201 277 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 MRPS10P82664 201 aaKnown RBP13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 ACOT7LQ6ZUV0 252 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 CCDC190Q86UF4 302 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 OR51S1Q8NGJ8 323 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 PYGO2Q9BRQ0 406 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 VCX3AQ9NNX9 186 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
PDLIM1-202ENST00000477757 LRP1Q07954 4544 aaKnown RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 IGLV5-52A0A0A0MRZ9 124 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 K7EP13 123 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 MRPS12O15235 138 aaKnown RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 IL5P05113 134 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 RPP30P78346 268 aaKnown RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 CYP2G1PQ6ZSU1 146 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 CIB3Q96Q77 187 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 ZNF331Q9NQX6 463 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
PDLIM1-202ENST00000477757 DUXBA0A1W2PPF3 345 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 NPIPB6E9PJ23 425 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 PAX4O43316 350 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 PLA2G1BP04054 148 aaKnown RBP13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 LINC00869P0C866 280 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 ANXA3P12429 323 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 C11orf72Q8NBR9 251 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 SMIM4Q8WVI0 70 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 SLC50A1Q9BRV3 221 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
PDLIM1-202ENST00000477757 TRAV12-3A0A0B4J271 114 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 PIGBOS1A0A0B4J2F0 54 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 MED6O75586 246 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 OR5G3P0C626 314 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 LYPD5Q6UWN5 251 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 S100A7AQ86SG5 101 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 CLVS1Q8IUQ0 354 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 ODF3Q96PU9 254 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 GSN-AS1Q9NRJ2 163 aa13.66□□□□□ -0.22
PDLIM1-202ENST00000477757 TRGV1A0A0A0MS02 117 aa13.65□□□□□ -0.22
PDLIM1-202ENST00000477757 PRAC2D3DTV9 90 aa13.65□□□□□ -0.22
PDLIM1-202ENST00000477757 SLC25A6P12236 298 aa13.65□□□□□ -0.22
PDLIM1-202ENST00000477757 SCGB3A2Q96PL1 93 aa13.65□□□□□ -0.22
PDLIM1-202ENST00000477757 LINC00854A0A1B0GVQ3 168 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 J3KRW8 73 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 LEPP41159 167 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 SELENOTP62341 195 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 DEFB104AQ8WTQ1 72 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 ST6GAL2Q96JF0 529 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 RNF24Q9Y225 148 aa13.64□□□□□ -0.23
PDLIM1-202ENST00000477757 WRBO00258 174 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 SYNGR2O43760 224 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 ATP6V1G2O95670 118 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 EVI2AP22794 236 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 SPANXN5Q5MJ07 72 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 WFDC10BQ8IUB3 73 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 FAM30AQ9NZY2 134 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 PRO0255Q9UI72 69 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 SCP2D1Q9UJQ7 156 aa13.63□□□□□ -0.23
PDLIM1-202ENST00000477757 A0A087WXM4 84 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 SMCO3A2RU48 225 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms