RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 FGF7P21781 194 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 ID1P41134 155 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 VWC2Q2TAL6 325 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 GPR82Q96P67 336 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 SHANK2-AS3Q9BTD1 123 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 SLC25A32Q9H2D1 315 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 AGRNO00468 2067 aa10.13□□□□□ -0.79
ATG9A-220ENST00000475339 H0YIZ8 118 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 H3BRN7 92 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 MPC2O95563 127 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 AMBPP02760 352 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
ATG9A-220ENST00000475339 MEOX2P50222 304 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 PLP1P60201 277 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 CLINT1Q14677 625 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 Q6ZRG5 221 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 OR5C1Q8NGR4 320 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 ARV1Q9H2C2 271 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
ATG9A-220ENST00000475339 MBD2Q9UBB5 411 aa10.12□□□□□ -0.79
ATG9A-220ENST00000475339 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 MPDU1O75352 247 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 CXCL3P19876 107 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 PSMB3P49720 205 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 NHLH2Q02577 135 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 FCN2Q15485 313 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 ACTL10Q5JWF8 245 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 THAP6Q8TBB0 222 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 UHRF2Q96PU4 802 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 RSG1Q9BU20 258 aa10.11□□□□□ -0.79
ATG9A-220ENST00000475339 ELOA3CA0A087WX78 387 aaPredicted RBP10.1□□□□□ -0.79
ATG9A-220ENST00000475339 CA1P00915 261 aaPredicted RBP10.1□□□□□ -0.79
ATG9A-220ENST00000475339 RBMY1CP0DJD4 496 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 B2MP61769 119 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 FGL1Q08830 312 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 C10orf113Q5VZT2 155 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 MIC13Q5XKP0 118 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 LINC00305Q7Z4B0 112 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 PFDN5Q99471 154 aa10.1□□□□□ -0.79
ATG9A-220ENST00000475339 ISLRO14498 428 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 RPL12P30050 165 aaKnown RBP10.09□□□□□ -0.79
ATG9A-220ENST00000475339 OPCMLQ14982 345 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 UBE2DNLQ8IWF7 75 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 Q8NAQ8 132 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 OR11H7Q8NGC8 314 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 NPCDR1Q9BY65 106 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 HSPB11Q9Y547 144 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 PXMP4Q9Y6I8 212 aa10.09□□□□□ -0.79
ATG9A-220ENST00000475339 SPP1P10451 314 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 RPL29P47914 159 aaKnown RBP10.08□□□□□ -0.8
ATG9A-220ENST00000475339 OXA1LQ15070 435 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 MORN3Q6PF18 240 aaPredicted RBP10.08□□□□□ -0.8
ATG9A-220ENST00000475339 PATE2Q6UY27 113 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 TRPT1Q86TN4 253 aaKnown RBP10.08□□□□□ -0.8
ATG9A-220ENST00000475339 ASB13Q8WXK3 278 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 ATP5SQ99766 215 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 DNAJC4Q9NNZ3 241 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 SLC39A9Q9NUM3 307 aa10.08□□□□□ -0.8
ATG9A-220ENST00000475339 DEFB131BA0A096LNP1 70 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 SOCS3O14543 225 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 IFNA5P01569 189 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 GIPP09681 153 aaPredicted RBP10.07□□□□□ -0.8
ATG9A-220ENST00000475339 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 BPIFA4PQ86YQ2 179 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 LRRC20Q8TCA0 184 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 TMEM37Q8WXS4 190 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 SMIM3Q9BZL3 60 aa10.07□□□□□ -0.8
ATG9A-220ENST00000475339 IGHV4-28A0A0C4DH34 117 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
ATG9A-220ENST00000475339 TMEM41BQ5BJD5 291 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 ZNF767PQ75MW2 155 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 CHAC2Q8WUX2 184 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 WDR61Q9GZS3 305 aaKnown RBP10.06□□□□□ -0.8
ATG9A-220ENST00000475339 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
ATG9A-220ENST00000475339 A0A087X0K7 114 aa10.05□□□□□ -0.8
ATG9A-220ENST00000475339 H3BMM0 161 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 SPATA31B1PQ5VZV4 182 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 ZNF738Q8NE65 137 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 OR4B1Q8NGF8 309 aa10.04□□□□□ -0.8
ATG9A-220ENST00000475339 SAV1Q9H4B6 383 aaPredicted RBP10.04□□□□□ -0.8
ATG9A-220ENST00000475339 CXCL2P19875 107 aa10.03□□□□□ -0.8
ATG9A-220ENST00000475339 C4BPBP20851 252 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms