RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ARPC5O15511 151 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-206ENST00000474828 SERF2P84101 59 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 C16orf92Q96LL3 132 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 SLC25A2Q9BXI2 301 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 RFNGQ9Y644 331 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 U3KQK5 164 aa12.43□□□□□ -0.42
SCAF11-206ENST00000474828 HIST1H1EP10412 219 aaKnown RBP12.42□□□□□ -0.42
SCAF11-206ENST00000474828 M6PRP20645 277 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 PDE6HQ13956 83 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 FFAR4Q5NUL3 377 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 RPL7L1Q6DKI1 246 aaKnown RBP12.42□□□□□ -0.42
SCAF11-206ENST00000474828 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-206ENST00000474828 MIR17HGQ75NE6 70 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 SLC50A1Q9BRV3 221 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 RPRMQ9NS64 109 aa12.42□□□□□ -0.42
SCAF11-206ENST00000474828 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 A0A0J9YX75 114 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 JTBO76095 146 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 SPP1P10451 314 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 STHQ8IWL8 128 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-206ENST00000474828 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 ZNF586Q9NXT0 402 aa12.41□□□□□ -0.42
SCAF11-206ENST00000474828 A0A0D9SG52 128 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 NDUFB4O95168 129 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.42
SCAF11-206ENST00000474828 RHOBP62745 196 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-206ENST00000474828 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 ACTL10Q5JWF8 245 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 RNF183Q96D59 192 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 ZNF503Q96F45 646 aa12.4□□□□□ -0.42
SCAF11-206ENST00000474828 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.43
SCAF11-206ENST00000474828 BORCS7-ASMTA0A0B4J1R7 106 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 SLC17A3O00476 420 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 PSG3Q16557 428 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 RPP25LQ8N5L8 163 aaKnown RBP12.39□□□□□ -0.43
SCAF11-206ENST00000474828 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 CSNK1G2-AS1Q8NCQ2 148 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 LINC00052Q96N35 136 aa12.39□□□□□ -0.43
SCAF11-206ENST00000474828 MBP02144 154 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 C1QBP02746 253 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 DEFB1P60022 68 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
SCAF11-206ENST00000474828 SH3BGRL3Q9H299 93 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
SCAF11-206ENST00000474828 PYYP10082 97 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 RAB2AP61019 212 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 AMTNQ6UX39 209 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 ARPC5LQ9BPX5 153 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
SCAF11-206ENST00000474828 F6UB75 175 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 SPRY2O43597 315 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 NBEAP1P0C6P0 100 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 C4BPBP20851 252 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 TAS2R45P59539 299 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 RNF141Q8WVD5 230 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 RETNQ9HD89 108 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 AGRNO00468 2067 aa12.36□□□□□ -0.43
SCAF11-206ENST00000474828 A0A1B0GVG6 124 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 BCL2L11O43521 198 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 DUSP14O95147 198 aaKnown RBP12.35□□□□□ -0.43
SCAF11-206ENST00000474828 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 PSG9Q00887 426 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 PQLC2Q6ZP29 291 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 AKAP14Q86UN6 197 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 LYPD1Q8N2G4 141 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 OR8A1Q8NGG7 326 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
SCAF11-206ENST00000474828 H3BTX0 84 aa12.34□□□□□ -0.43
SCAF11-206ENST00000474828 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-206ENST00000474828 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
SCAF11-206ENST00000474828 NUTF2P61970 127 aaKnown RBP12.34□□□□□ -0.43
SCAF11-206ENST00000474828 DEFB135Q30KP9 77 aa12.34□□□□□ -0.43
SCAF11-206ENST00000474828 LGALSLQ3ZCW2 172 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-206ENST00000474828 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
SCAF11-206ENST00000474828 RPUSD4Q96CM3 377 aaKnown RBP12.34□□□□□ -0.43
SCAF11-206ENST00000474828 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
SCAF11-206ENST00000474828 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms