RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 OR2T8A6NH00 312 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 TSTD3H0UI37 97 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 GABARAPH6UMI1 98 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 H7BYZ3 331 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 IGLV1-51P01701 117 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 IL9P15248 144 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 SAMD13Q5VXD3 122 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 TOMM20LQ6UXN7 152 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 Q6ZSA8 131 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 ANGPTL5Q86XS5 388 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 Q8N814 137 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 C10orf105Q8TEF2 133 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 THEM6Q8WUY1 208 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 ANP32BQ92688 251 aaKnown RBP1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 HYLS1Q96M11 299 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 TCEAL2Q9H3H9 227 aaPredicted RBP1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 LRTM1Q9HBL6 345 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 NUP98P52948 1817 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 MYO5AQ9Y4I1 1855 aaKnown RBP1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 ARHGEF11O15085 1522 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 MED13Q9UHV7 2174 aa1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 NUP210LQ5VU65 1888 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 KPNA4O00629 521 aaPredicted RBP1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 CCL16O15467 120 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 FAM107AO95990 144 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 CD2P06729 351 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 FABP2P12104 132 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 EIF3IQ13347 325 aaKnown RBP1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 FAM216BQ8N7L0 139 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 OR9Q1Q8NGQ5 310 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 MUCL1Q96DR8 90 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 TAS2R7Q9NYW3 318 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 UNC13AQ9UPW8 1703 aa1.29□□□□□ -2.2
PRPF40A-205ENST00000467114 LOC110117498A0A087WWA1 95 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 GEMIN2O14893 280 aaKnown RBP1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 LYRM1O43325 122 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 MT-ND6P03923 174 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 NBEAP1P0C6P0 100 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 LYNX1P0DP58 116 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 SDC2P34741 201 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 POLR2HP52434 150 aaKnown RBP1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 NDUFA6P56556 154 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 FAM74A1Q5RGS3 127 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 HRCT1Q6UXD1 115 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 SKA2Q8WVK7 121 aaPredicted RBP1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 GGACTQ9BVM4 153 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 MED31Q9Y3C7 131 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 HSPB11Q9Y547 144 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 NCAPD3P42695 1498 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 CEP192Q8TEP8 1941 aa1.28□□□□□ -2.2
PRPF40A-205ENST00000467114 LAMB2P55268 1798 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 ANKRD30AQ9BXX3 1397 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 A0A087WSZ3 146 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 TRAV27A0A087WT01 109 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 TRBV6-7A0A0A0MS04 114 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 hDV103S1A0JD37 113 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 PRORSD1PA6NEY8 169 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 RPL7P18124 248 aaKnown RBP1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 LRRC18Q8N456 261 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 TMEM35BQ8NCS4 154 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 PATE1Q8WXA2 126 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 CCDC115Q96NT0 180 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 TRAPPC2LQ9UL33 140 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 GINS2Q9Y248 185 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 EXPH5Q8NEV8 1989 aa1.27□□□□□ -2.21
PRPF40A-205ENST00000467114 N4BP2Q86UW6 1770 aaPredicted RBP1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 TNS3Q68CZ2 1445 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 IGHV1-58A0A0C4DH39 117 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 M0R2N4 97 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 ANGP03950 147 aaKnown RBP1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 CXCL8P10145 99 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 CIRBPQ14011 172 aaKnown RBP1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 LINC00305Q7Z4B0 112 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 ARPINQ7Z6K5 226 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 Q8TAT8 98 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 ZNF431Q8TF32 576 aaPredicted RBP1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 BORCS5Q969J3 196 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 LXNQ9BS40 222 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 ZFP30Q9Y2G7 519 aa1.26□□□□□ -2.21
PRPF40A-205ENST00000467114 BCL9O00512 1426 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 KDM6AO15550 1401 aaPredicted RBP1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 TRAPPC8Q9Y2L5 1435 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 RP1L1Q8IWN7 2480 aaPredicted RBP1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 RTL9Q8NET4 1388 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 F8W1H4 67 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 INE1O15225 51 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 MRPS36P82909 103 aaKnown RBP1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 MPV17LQ2QL34 196 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 TMEM14EPQ6UXP3 125 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 GKN2Q86XP6 184 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 OR4B1Q8NGF8 309 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 OR5H6Q8NGV6 325 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 PYDC1Q8WXC3 89 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 LINC00052Q96N35 136 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 MCEEQ96PE7 176 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms