RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TEX15Q9BXT5 2789 aa14.21□□□□□ -0.14
COL9A3-205ENST00000466192 SPINK4O60575 86 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 IGHV4-31P0DP07 118 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 CBLN1P23435 193 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 GPR183P32249 361 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 CRIP2P52943 208 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-205ENST00000466192 ZNF414Q96IQ9 312 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 HELZ2Q9BYK8 2649 aaKnown RBP14.2□□□□□ -0.14
COL9A3-205ENST00000466192 IGHV3-35A0A0C4DH35 117 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 FRMD6-AS1P0C7T7 363 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 SLC35B1P78383 322 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 CREBBPQ92793 2442 aa14.2□□□□□ -0.14
COL9A3-205ENST00000466192 PRRC2AP48634 2157 aaKnown RBP14.19□□□□□ -0.14
COL9A3-205ENST00000466192 TRBV19A0A075B6N1 114 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 AMBPP02760 352 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 IGLC2P0DOY2 106 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 HIST2H2BCQ6DN03 193 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 CMTM2Q8TAZ6 248 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 CCDC140Q96MF4 163 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 MRPS12O15235 138 aaKnown RBP14.19□□□□□ -0.14
COL9A3-205ENST00000466192 CLEC3BP05452 202 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 BLCAPP62952 87 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 KRTAP1-3Q8IUG1 177 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 FMC1Q96HJ9 113 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 GPR82Q96P67 336 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 PPP1R14DQ9NXH3 145 aa14.19□□□□□ -0.14
COL9A3-205ENST00000466192 MXRA5Q9NR99 2828 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 IGHV3OR16-8A0A075B7F1 116 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 J3QKU1 62 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 SCGB2A1O75556 95 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 IGHG2P01859 326 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 IGF1P05019 195 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 DEFB112Q30KQ8 113 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 NUDT10Q8NFP7 164 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 NUDT11Q96G61 164 aa14.18□□□□□ -0.14
COL9A3-205ENST00000466192 TRAV8-1A0A0A6YYK1 113 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 IER3P46695 156 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 Q6ZS46 218 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 S100A7AQ86SG5 101 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 Q96MF0 132 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 RNF24Q9Y225 148 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 SMIM27A0A1W2PRY6 76 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 M0QZK8 103 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 PRB4P10163 310 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-205ENST00000466192 CLEC19AQ6UXS0 136 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 GOLT1AQ6ZVE7 132 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 FAM231DQ6ZW35 169 aa14.17□□□□□ -0.14
COL9A3-205ENST00000466192 LTAP01374 205 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 SIGLEC15Q6ZMC9 328 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 EEF1AKMT3Q96AZ1 226 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 MLST8Q9BVC4 326 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 MBD6Q96DN6 1003 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 PSMG3-AS1Q96PY0 264 aa14.16□□□□□ -0.14
COL9A3-205ENST00000466192 SNURFLB1AK76 121 aa14.15□□□□□ -0.14
COL9A3-205ENST00000466192 IGHV4-59P01825 116 aa14.15□□□□□ -0.14
COL9A3-205ENST00000466192 TOMM20LQ6UXN7 152 aa14.15□□□□□ -0.14
COL9A3-205ENST00000466192 SMIM12Q96EX1 92 aa14.15□□□□□ -0.14
COL9A3-205ENST00000466192 MRPL18Q9H0U6 180 aaKnown RBP14.15□□□□□ -0.14
COL9A3-205ENST00000466192 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
COL9A3-205ENST00000466192 TRBV7-1A0A0A6YYK4 115 aa14.15□□□□□ -0.15
COL9A3-205ENST00000466192 FSHBP01225 129 aa14.15□□□□□ -0.15
COL9A3-205ENST00000466192 PPIFP30405 207 aaKnown RBP14.15□□□□□ -0.15
COL9A3-205ENST00000466192 ATP5G2Q06055 141 aa14.15□□□□□ -0.15
COL9A3-205ENST00000466192 MRPL54Q6P161 138 aaKnown RBP14.15□□□□□ -0.15
COL9A3-205ENST00000466192 LINC00322Q6ZN03 302 aaPredicted RBP14.15□□□□□ -0.15
COL9A3-205ENST00000466192 ZFAND3Q9H8U3 227 aa14.15□□□□□ -0.15
COL9A3-205ENST00000466192 RABAC1Q9UI14 185 aa14.15□□□□□ -0.15
COL9A3-205ENST00000466192 RELQ04864 619 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-205ENST00000466192 GNB4Q9HAV0 340 aa14.14□□□□□ -0.15
COL9A3-205ENST00000466192 EREGO14944 169 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 IGLV2-11P01706 119 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 TRGV3P03979 118 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 RPL19P84098 196 aaKnown RBP14.13□□□□□ -0.15
COL9A3-205ENST00000466192 PRSS57Q6UWY2 283 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 Q86TA4 180 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 LYPD1Q8N2G4 141 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 FAM223BA6NKX1 122 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 M0R3E3 92 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 BMPR1BO00238 502 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 FAM223AQ8IWN6 122 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 GRAMD2BQ96HH9 432 aa14.13□□□□□ -0.15
COL9A3-205ENST00000466192 A0A1B0GUS0 222 aa14.12□□□□□ -0.15
COL9A3-205ENST00000466192 GRIFINA4D1Z8 144 aa14.12□□□□□ -0.15
COL9A3-205ENST00000466192 Q71RC1 249 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-205ENST00000466192 GNB1LQ9BYB4 327 aa14.12□□□□□ -0.15
COL9A3-205ENST00000466192 IZUMO1RA6ND01 250 aa14.12□□□□□ -0.15
COL9A3-205ENST00000466192 CIARTQ8N365 385 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-205ENST00000466192 NAT8BQ9UHF3 227 aa14.12□□□□□ -0.15
COL9A3-205ENST00000466192 RPL7P18124 248 aaKnown RBP14.11□□□□□ -0.15
COL9A3-205ENST00000466192 TPPP2P59282 170 aa14.11□□□□□ -0.15
COL9A3-205ENST00000466192 PDE6HQ13956 83 aa14.11□□□□□ -0.15
COL9A3-205ENST00000466192 ASCL2Q99929 193 aa14.11□□□□□ -0.15
COL9A3-205ENST00000466192 PDZD2O15018 2839 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 NUP35Q8NFH5 326 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 AAMDCQ9H7C9 122 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 CLPSL1A2RUU4 121 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 BRI3O95415 125 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 WDR73Q6P4I2 378 aa14.1□□□□□ -0.15
COL9A3-205ENST00000466192 TMEM136Q6ZRR5 245 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms