RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 LYRM2Q9NU23 88 aaPredicted RBP15.61■□□□□ 0.09
LIME1-203ENST00000465591 DNAH6Q9C0G6 4158 aa15.61■□□□□ 0.09
LIME1-203ENST00000465591 TRAV10A0A0B4J240 114 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 CXCL3P19876 107 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 PXDC1Q5TGL8 231 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 LINC00305Q7Z4B0 112 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 TMEM252Q8N6L7 170 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 OR11H7Q8NGC8 314 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 WDR83OSQ9Y284 106 aa15.6■□□□□ 0.09
LIME1-203ENST00000465591 DNAH10Q8IVF4 4471 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 CAMLGP49069 296 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 EMP1P54849 157 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 H2BFSP57053 126 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 PRR20EP86478 221 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 PRR20CP86479 221 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 PRR20DP86480 221 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 PRR20BP86481 221 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 PRR20AP86496 221 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 VWC2Q2TAL6 325 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 MIC13Q5XKP0 118 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 ZNF738Q8NE65 137 aa15.59■□□□□ 0.09
LIME1-203ENST00000465591 SMIM9A6NGZ8 99 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 M0R2Z0 102 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 CRXO43186 299 aaPredicted RBP15.58■□□□□ 0.08
LIME1-203ENST00000465591 SULT1A1P50225 295 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 OPCMLQ14982 345 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 SPINK13Q1W4C9 94 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 UQCC1Q9NVA1 299 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 GOLT1BQ9Y3E0 138 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 RFNGQ9Y644 331 aa15.58■□□□□ 0.08
LIME1-203ENST00000465591 COX7A2P2O60397 106 aa15.57■□□□□ 0.08
LIME1-203ENST00000465591 PSG3Q16557 428 aa15.57■□□□□ 0.08
LIME1-203ENST00000465591 IGF2BP2-AS1Q96M15 143 aa15.57■□□□□ 0.08
LIME1-203ENST00000465591 FRAS1Q86XX4 4008 aa15.57■□□□□ 0.08
LIME1-203ENST00000465591 IGHV4-4A0A075B6R2 117 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 UBE2L5PA0A1B0GUS4 154 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 H3BTX0 84 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 DUSP14O95147 198 aaKnown RBP15.56■□□□□ 0.08
LIME1-203ENST00000465591 PRM2P04554 102 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 PET100P0DJ07 73 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 TCTAP57738 103 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 FCN2Q15485 313 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 C10orf113Q5VZT2 155 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 S100A7AQ86SG5 101 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 PLA2G2EQ9NZK7 142 aa15.56■□□□□ 0.08
LIME1-203ENST00000465591 DEFB131BA0A096LNP1 70 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 TRAV5A0A0B4J249 113 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 E5RGE8 158 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 SLC17A3O00476 420 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 HIST1H1AQ02539 215 aaPredicted RBP15.55■□□□□ 0.08
LIME1-203ENST00000465591 LRRC37A5PQ49AS3 106 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 BAP18Q8IXM2 172 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 OR8A1Q8NGG7 326 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 PPP1R1CQ8WVI7 109 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 ZNF331Q9NQX6 463 aaPredicted RBP15.55■□□□□ 0.08
LIME1-203ENST00000465591 DKK2Q9UBU2 259 aa15.55■□□□□ 0.08
LIME1-203ENST00000465591 LOC102723971A0A1B0GUV8 181 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 TMEM189A5PLL7 270 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 HBE1P02100 147 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 SPART-AS1P0CW21 52 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 S100A11P31949 105 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 FAM222AQ5U5X8 452 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 LRRC20Q8TCA0 184 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 ASB13Q8WXK3 278 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 DNAJC4Q9NNZ3 241 aa15.54■□□□□ 0.08
LIME1-203ENST00000465591 TRAV12-2A0A075B6T6 113 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 H0YIZ8 118 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 H3BQ15 152 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 IGLC2P0DOY2 106 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 BAXQ07812 192 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 RAB31Q13636 194 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 LCN15Q6UWW0 184 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 STX12Q86Y82 276 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 BPIFA4PQ86YQ2 179 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 RPUSD4Q96CM3 377 aaKnown RBP15.53■□□□□ 0.08
LIME1-203ENST00000465591 RNF126Q9BV68 326 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 OR5AC2Q9NZP5 309 aa15.53■□□□□ 0.08
LIME1-203ENST00000465591 BOLA2-SMG1P6H3BVE0 249 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 CXCL2P19875 107 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 FGF7P21781 194 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 RPL29P47914 159 aaKnown RBP15.52■□□□□ 0.08
LIME1-203ENST00000465591 NHLH2Q02577 135 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 RRN3P1Q2M238 152 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 Q6ZRG5 221 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 SLC39A9Q9NUM3 307 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 RNF24Q9Y225 148 aa15.52■□□□□ 0.08
LIME1-203ENST00000465591 YTHDF2Q9Y5A9 579 aaKnown RBP15.52■□□□□ 0.08
LIME1-203ENST00000465591 ZNF705GA8MUZ8 300 aaPredicted RBP15.51■□□□□ 0.07
LIME1-203ENST00000465591 PRAC2D3DTV9 90 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 MPC2O95563 127 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 INSP01308 110 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 AMBPP02760 352 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 B2MP61769 119 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 HBG1P69891 147 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 HBG2P69892 147 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 SAT2Q96F10 170 aaPredicted RBP15.51■□□□□ 0.07
LIME1-203ENST00000465591 SLC50A1Q9BRV3 221 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 TMEM208Q9BTX3 173 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 SLC25A31Q9H0C2 315 aa15.51■□□□□ 0.07
LIME1-203ENST00000465591 RHOBP62745 196 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms