RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 H3BQ15 152 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 ARPC5O15511 151 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 CA1P00915 261 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 GUK1Q16774 197 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 SPATA31B1PQ5VZV4 182 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 RNF183Q96D59 192 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 MRPL32Q9BYC8 188 aaKnown RBP10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 FUT9Q9Y231 359 aa10.64□□□□□ -0.71
SQSTM1-205ENST00000464493 F6UB75 175 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 H3BTX0 84 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 PSG3Q16557 428 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 HSD17B11Q8NBQ5 300 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 FAM167A-AS1Q96KT0 104 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 SLC25A2Q9BXI2 301 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 MFFQ9GZY8 342 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF331Q9NQX6 463 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
SQSTM1-205ENST00000464493 BORCS7-ASMTA0A0B4J1R7 106 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 A0A0J9YX75 114 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 SLC17A3O00476 420 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 TAAR5O14804 337 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 PYYP10082 97 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 HIST1H1EP10412 219 aaKnown RBP10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 M6PRP20645 277 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 ATP6V0CP27449 155 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 RHOBP62745 196 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 TMEM41BQ5BJD5 291 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 RPL7L1Q6DKI1 246 aaKnown RBP10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF738Q8NE65 137 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 OR4B1Q8NGF8 309 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 CLUHP3Q96NS8 147 aa10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 PSMG3Q9BT73 122 aaPredicted RBP10.62□□□□□ -0.71
SQSTM1-205ENST00000464493 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 HMSDA8MTL9 139 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 OR51M1Q9H341 326 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF253O75346 499 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 JTBO76095 146 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 DUSP14O95147 198 aaKnown RBP10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 C4BPBP20851 252 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 TAS2R45P59539 299 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 SERF2P84101 59 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 PSG9Q00887 426 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 RPUSD4Q96CM3 377 aaKnown RBP10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 GNPNAT1Q96EK6 184 aaPredicted RBP10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 EDA2RQ9HAV5 297 aa10.6□□□□□ -0.71
SQSTM1-205ENST00000464493 A0A1W2PPV4 95 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR7C2O60412 319 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 MBP02144 154 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 NBEAP1P0C6P0 100 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 RAB2AP61019 212 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 PDE6HQ13956 83 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 ZNF345Q14585 488 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 KCNRGQ8N5I3 272 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR10G4Q8NGN3 311 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR10G9Q8NGN4 311 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR10G7Q8NGN6 311 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 RNF141Q8WVD5 230 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 RARRES2Q99969 163 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 SH3BGRL3Q9H299 93 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 CYTL1Q9NRR1 136 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
SQSTM1-205ENST00000464493 hCG_2014768A0A024R1R8 64 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 A0A0D9SG52 128 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 NDUFB4O95168 129 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 OR10J4P0C629 311 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 FXYD7P58549 80 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 KHDC3LQ587J8 217 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 FAM122CQ6P4D5 195 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 ZNF503Q96F45 646 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
SQSTM1-205ENST00000464493 A8MTW9 85 aa10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 EIF3GO75821 320 aaKnown RBP eCLIP10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 HIST1H1AQ02539 215 aaPredicted RBP10.57□□□□□ -0.72
SQSTM1-205ENST00000464493 TCTE3Q8IZS6 198 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms