RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 BPIFA4PQ86YQ2 179 aa17.33■□□□□ 0.36
SMKR1-201ENST00000462322 OR1L4Q8NGR5 311 aa17.33■□□□□ 0.36
SMKR1-201ENST00000462322 SLC39A9Q9NUM3 307 aa17.33■□□□□ 0.36
SMKR1-201ENST00000462322 DUSP14O95147 198 aaKnown RBP17.32■□□□□ 0.36
SMKR1-201ENST00000462322 CXCL3P19876 107 aa17.32■□□□□ 0.36
SMKR1-201ENST00000462322 B2MP61769 119 aa17.32■□□□□ 0.36
SMKR1-201ENST00000462322 OPCMLQ14982 345 aa17.32■□□□□ 0.36
SMKR1-201ENST00000462322 MORN5Q5VZ52 161 aa17.32■□□□□ 0.36
SMKR1-201ENST00000462322 HRH4Q9H3N8 390 aa17.32■□□□□ 0.36
SMKR1-201ENST00000462322 IGHV3OR16-12A0A075B7B8 117 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 SNRPCP09234 159 aaKnown RBP17.31■□□□□ 0.36
SMKR1-201ENST00000462322 HLA-DMBP28068 263 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 CNN1P51911 297 aaKnown RBP17.31■□□□□ 0.36
SMKR1-201ENST00000462322 ZNF705AQ6ZN79 300 aaPredicted RBP17.31■□□□□ 0.36
SMKR1-201ENST00000462322 OR5C1Q8NGR4 320 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 CHAC2Q8WUX2 184 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 PPP1R1CQ8WVI7 109 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 PFDN5Q99471 154 aa17.31■□□□□ 0.36
SMKR1-201ENST00000462322 A8MTW9 85 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 MPDU1O75352 247 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 ZNF705DP0CH99 300 aaPredicted RBP17.3■□□□□ 0.36
SMKR1-201ENST00000462322 ZNF705BP0CI00 300 aaPredicted RBP17.3■□□□□ 0.36
SMKR1-201ENST00000462322 CXCL2P19875 107 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 PSG3Q16557 428 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 LCN15Q6UWW0 184 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 PXMP4Q9Y6I8 212 aa17.3■□□□□ 0.36
SMKR1-201ENST00000462322 ZNF705FA8MVS1 300 aaPredicted RBP17.29■□□□□ 0.36
SMKR1-201ENST00000462322 CLINT1Q14677 625 aa17.29■□□□□ 0.36
SMKR1-201ENST00000462322 AMTNQ6UX39 209 aa17.29■□□□□ 0.36
SMKR1-201ENST00000462322 THAP6Q8TBB0 222 aa17.29■□□□□ 0.36
SMKR1-201ENST00000462322 NEU1Q99519 415 aa17.29■□□□□ 0.36
SMKR1-201ENST00000462322 GOLT1BQ9Y3E0 138 aa17.29■□□□□ 0.36
SMKR1-201ENST00000462322 TRAV5A0A0B4J249 113 aa17.28■□□□□ 0.36
SMKR1-201ENST00000462322 SLC50A1Q9BRV3 221 aa17.28■□□□□ 0.36
SMKR1-201ENST00000462322 NPCDR1Q9BY65 106 aa17.28■□□□□ 0.36
SMKR1-201ENST00000462322 ALMS1Q8TCU4 4167 aa17.28■□□□□ 0.36
SMKR1-201ENST00000462322 SMIM9A6NGZ8 99 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 H3BTX0 84 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 MPC2O95563 127 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 PET100P0DJ07 73 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 HIST1H1AQ02539 215 aaPredicted RBP17.27■□□□□ 0.36
SMKR1-201ENST00000462322 OR11H7Q8NGC8 314 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 OR8A1Q8NGG7 326 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 LINC00476Q8WZB0 136 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 RNF126Q9BV68 326 aa17.27■□□□□ 0.36
SMKR1-201ENST00000462322 ZNF331Q9NQX6 463 aaPredicted RBP17.27■□□□□ 0.36
SMKR1-201ENST00000462322 PTTG1O95997 202 aa17.26■□□□□ 0.35
SMKR1-201ENST00000462322 RPUSD4Q96CM3 377 aaKnown RBP17.26■□□□□ 0.35
SMKR1-201ENST00000462322 DNAH1Q9P2D7 4330 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 C11orf94C9JXX5 98 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 H3BQ15 152 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 M0R2Z0 102 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 AMBPP02760 352 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 IGLC2P0DOY2 106 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 RHOBP62745 196 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 SPINK13Q1W4C9 94 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 C1orf158Q8N1D5 194 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 C2CD4CQ8TF44 421 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 IGF2BP2-AS1Q96M15 143 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 PPP1R14DQ9NXH3 145 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 CELA1Q9UNI1 258 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 RFNGQ9Y644 331 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 ALG5Q9Y673 324 aa17.25■□□□□ 0.35
SMKR1-201ENST00000462322 SLC17A3O00476 420 aa17.24■□□□□ 0.35
SMKR1-201ENST00000462322 LY6G6CO95867 125 aa17.24■□□□□ 0.35
SMKR1-201ENST00000462322 PRB4P10163 310 aaPredicted RBP17.24■□□□□ 0.35
SMKR1-201ENST00000462322 EMP1P54849 157 aa17.24■□□□□ 0.35
SMKR1-201ENST00000462322 Q6ZTC4 211 aa17.24■□□□□ 0.35
SMKR1-201ENST00000462322 TMEM208Q9BTX3 173 aa17.24■□□□□ 0.35
SMKR1-201ENST00000462322 TMEM189A5PLL7 270 aa17.23■□□□□ 0.35
SMKR1-201ENST00000462322 GUK1Q16774 197 aa17.23■□□□□ 0.35
SMKR1-201ENST00000462322 GCSAMLQ5JQS6 135 aa17.23■□□□□ 0.35
SMKR1-201ENST00000462322 BOLA2-SMG1P6H3BVE0 249 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 INSP01308 110 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 HBE1P02100 147 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 ZNF767PQ75MW2 155 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 SAT2Q96F10 170 aaPredicted RBP17.22■□□□□ 0.35
SMKR1-201ENST00000462322 WDR61Q9GZS3 305 aaKnown RBP17.22■□□□□ 0.35
SMKR1-201ENST00000462322 KCNIP2Q9NS61 270 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 MBD2Q9UBB5 411 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 HSPB11Q9Y547 144 aa17.22■□□□□ 0.35
SMKR1-201ENST00000462322 HYDINQ4G0P3 5121 aa17.21■□□□□ 0.35
SMKR1-201ENST00000462322 TRAV10A0A0B4J240 114 aa17.21■□□□□ 0.35
SMKR1-201ENST00000462322 RPL12P30050 165 aaKnown RBP17.21■□□□□ 0.35
SMKR1-201ENST00000462322 C12orf74Q32Q52 190 aa17.21■□□□□ 0.35
SMKR1-201ENST00000462322 ATP5SQ99766 215 aa17.21■□□□□ 0.35
SMKR1-201ENST00000462322 CRXO43186 299 aaPredicted RBP17.2■□□□□ 0.34
SMKR1-201ENST00000462322 RRN3P1Q2M238 152 aa17.2■□□□□ 0.34
SMKR1-201ENST00000462322 BAP18Q8IXM2 172 aa17.2■□□□□ 0.34
SMKR1-201ENST00000462322 ZNF586Q9NXT0 402 aa17.2■□□□□ 0.34
SMKR1-201ENST00000462322 TMEM14CQ9P0S9 112 aa17.2■□□□□ 0.34
SMKR1-201ENST00000462322 TRAV12-2A0A075B6T6 113 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 LOC102723971A0A1B0GUV8 181 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 IGLL5B9A064 214 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 C17orf112F2Z3M2 114 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 SPART-AS1P0CW21 52 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 SMIM3Q9BZL3 60 aa17.19■□□□□ 0.34
SMKR1-201ENST00000462322 PRAC2D3DTV9 90 aa17.18■□□□□ 0.34
SMKR1-201ENST00000462322 OR10J6PQ8NGY7 276 aa17.18■□□□□ 0.34
SMKR1-201ENST00000462322 MED28Q9H204 178 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms