RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SMIM9A6NGZ8 99 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 MRPS12O15235 138 aaKnown RBP7.3□□□□□ -1.24
SF3A3-204ENST00000462258 INSP01308 110 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 HBE1P02100 147 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 AMBPP02760 352 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 CXCL3P19876 107 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 EMP1P54849 157 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 HBG1P69891 147 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 HBG2P69892 147 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 BAXQ07812 192 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 IL15RAQ13261 267 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 RAB31Q13636 194 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 SPINK13Q1W4C9 94 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 VWC2Q2TAL6 325 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 C10orf113Q5VZT2 155 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 LCN15Q6UWW0 184 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 NRARPQ7Z6K4 114 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 C1orf158Q8N1D5 194 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 RPP25LQ8N5L8 163 aaKnown RBP7.3□□□□□ -1.24
SF3A3-204ENST00000462258 TMEM252Q8N6L7 170 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 OR11H7Q8NGC8 314 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 LRRC20Q8TCA0 184 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 IGF2BP2-AS1Q96M15 143 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 APLNQ9ULZ1 77 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 WDR83OSQ9Y284 106 aa7.3□□□□□ -1.24
SF3A3-204ENST00000462258 IGHV4-4A0A075B6R2 117 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 DEFB131BA0A096LNP1 70 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 TEX48A0A1B0GUV7 120 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 LOC102723971A0A1B0GUV8 181 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 BOLA2-SMG1P6H3BVE0 249 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 M0R2Z0 102 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 PRAF2O60831 178 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 S100A11P31949 105 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 IFITM3Q01628 133 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-204ENST00000462258 OPCMLQ14982 345 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 MORN5Q5VZ52 161 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 BPIFA4PQ86YQ2 179 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 OR1L4Q8NGR5 311 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 TMEM37Q8WXS4 190 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 PFDN5Q99471 154 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 SLC50A1Q9BRV3 221 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 TMEM208Q9BTX3 173 aa7.29□□□□□ -1.24
SF3A3-204ENST00000462258 INMT-MINDY4F8WBC2 141 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 SLC17A3O00476 420 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 CRXO43186 299 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-204ENST00000462258 SIX6O95475 246 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 SNRPCP09234 159 aaKnown RBP7.28□□□□□ -1.24
SF3A3-204ENST00000462258 FGF7P21781 194 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 B2MP61769 119 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PRR20EP86478 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PRR20CP86479 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PRR20DP86480 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PRR20BP86481 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PRR20AP86496 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 PSG3Q16557 428 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 LRRC37A5PQ49AS3 106 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 Q6ZRG5 221 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 OR8A1Q8NGG7 326 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 RNF126Q9BV68 326 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 ZNF331Q9NQX6 463 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-204ENST00000462258 DKK2Q9UBU2 259 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 YTHDF2Q9Y5A9 579 aaKnown RBP7.28□□□□□ -1.24
SF3A3-204ENST00000462258 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
SF3A3-204ENST00000462258 H3BTX0 84 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 PRB4P10163 310 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-204ENST00000462258 RPL29P47914 159 aaKnown RBP7.27□□□□□ -1.25
SF3A3-204ENST00000462258 DEFA1P59665 94 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 DEFA3P59666 94 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 RHOBP62745 196 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 FAM222AQ5U5X8 452 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 RPUSD4Q96CM3 377 aaKnown RBP7.27□□□□□ -1.25
SF3A3-204ENST00000462258 NMES1Q9C002 83 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 SLC39A9Q9NUM3 307 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
SF3A3-204ENST00000462258 TRAV12-2A0A075B6T6 113 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 E5RGE8 158 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 MPDU1O75352 247 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 ATP6V1FQ16864 119 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 NIPSNAP3BQ9BS92 247 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 SLC25A31Q9H0C2 315 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 DNAJC4Q9NNZ3 241 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 PPP1R14DQ9NXH3 145 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 OR5AC2Q9NZP5 309 aa7.26□□□□□ -1.25
SF3A3-204ENST00000462258 TRAV5A0A0B4J249 113 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 H3BQ15 152 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 RLN2P04090 185 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 CDKN1BP46527 198 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 CLINT1Q14677 625 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 GUK1Q16774 197 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 THAP6Q8TBB0 222 aa7.25□□□□□ -1.25
SF3A3-204ENST00000462258 CHAC2Q8WUX2 184 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms