RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 C1orf158Q8N1D5 194 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 ZNF738Q8NE65 137 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 MARVELD1Q9BSK0 173 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 SMIM9A6NGZ8 99 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 HBG1P69891 147 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 HBG2P69892 147 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 C10orf113Q5VZT2 155 aa17.01■□□□□ 0.31
HOXB3-202ENST00000460160 DUSP14O95147 198 aaKnown RBP17■□□□□ 0.31
HOXB3-202ENST00000460160 OPCMLQ14982 345 aa17■□□□□ 0.31
HOXB3-202ENST00000460160 OR11H7Q8NGC8 314 aa17■□□□□ 0.31
HOXB3-202ENST00000460160 NMES1Q9C002 83 aa17■□□□□ 0.31
HOXB3-202ENST00000460160 BAXQ07812 192 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 PSG3Q16557 428 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 C12orf74Q32Q52 190 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 Q6ZRG5 221 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 BPIFA4PQ86YQ2 179 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 LRRC20Q8TCA0 184 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 DNAJC4Q9NNZ3 241 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 GOLT1BQ9Y3E0 138 aa16.99■□□□□ 0.31
HOXB3-202ENST00000460160 SNRPCP09234 159 aaKnown RBP16.98■□□□□ 0.31
HOXB3-202ENST00000460160 CXCL2P19875 107 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 DEFA1P59665 94 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 DEFA3P59666 94 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 ZNF767PQ75MW2 155 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 OR5AC2Q9NZP5 309 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 RFNGQ9Y644 331 aa16.98■□□□□ 0.31
HOXB3-202ENST00000460160 TRAV10A0A0B4J240 114 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 IGLL5B9A064 214 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 M0R2Z0 102 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 RPL29P47914 159 aaKnown RBP16.97■□□□□ 0.31
HOXB3-202ENST00000460160 ATP6V1FQ16864 119 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 LGALS9CQ6DKI2 356 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 LCN15Q6UWW0 184 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 CHAC2Q8WUX2 184 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 IGF2BP2-AS1Q96M15 143 aa16.97■□□□□ 0.31
HOXB3-202ENST00000460160 TMEM189A5PLL7 270 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 H0YIZ8 118 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 FGF7P21781 194 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 EMP1P54849 157 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 H2BFSP57053 126 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 TCTAP57738 103 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 SPINK13Q1W4C9 94 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 LRRC37A5PQ49AS3 106 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 OR8A1Q8NGG7 326 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 OR1L4Q8NGR5 311 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 ZNF331Q9NQX6 463 aaPredicted RBP16.96■□□□□ 0.31
HOXB3-202ENST00000460160 SLC39A9Q9NUM3 307 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 FRAS1Q86XX4 4008 aa16.96■□□□□ 0.31
HOXB3-202ENST00000460160 E5RGE8 158 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 CRXO43186 299 aaPredicted RBP16.96■□□□□ 0.3
HOXB3-202ENST00000460160 IGLC2P0DOY2 106 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 PRB4P10163 310 aaPredicted RBP16.96■□□□□ 0.3
HOXB3-202ENST00000460160 B2MP61769 119 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 HIST1H1AQ02539 215 aaPredicted RBP16.96■□□□□ 0.3
HOXB3-202ENST00000460160 NHLH2Q02577 135 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 SLC50A1Q9BRV3 221 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 APLNQ9ULZ1 77 aa16.96■□□□□ 0.3
HOXB3-202ENST00000460160 DNAH6Q9C0G6 4158 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 TRAV5A0A0B4J249 113 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 SLC17A3O00476 420 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 AMBPP02760 352 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 RLN2P04090 185 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 CYCSP99999 105 aaKnown RBP16.95■□□□□ 0.3
HOXB3-202ENST00000460160 RPUSD4Q96CM3 377 aaKnown RBP16.95■□□□□ 0.3
HOXB3-202ENST00000460160 PFDN5Q99471 154 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 PXMP4Q9Y6I8 212 aa16.95■□□□□ 0.3
HOXB3-202ENST00000460160 H3BQ15 152 aa16.94■□□□□ 0.3
HOXB3-202ENST00000460160 H3BTX0 84 aa16.94■□□□□ 0.3
HOXB3-202ENST00000460160 HBE1P02100 147 aa16.94■□□□□ 0.3
HOXB3-202ENST00000460160 OR5C1Q8NGR4 320 aa16.94■□□□□ 0.3
HOXB3-202ENST00000460160 BOLA2-SMG1P6H3BVE0 249 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 MPDU1O75352 247 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 SPART-AS1P0CW21 52 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 BAP18Q8IXM2 172 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 NPCDR1Q9BY65 106 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 SLC25A31Q9H0C2 315 aa16.93■□□□□ 0.3
HOXB3-202ENST00000460160 DEFB131BA0A096LNP1 70 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 LOC102723971A0A1B0GUV8 181 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 INSP01308 110 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 RRN3P1Q2M238 152 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 THAP6Q8TBB0 222 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 PPP1R1CQ8WVI7 109 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 SAT2Q96F10 170 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-202ENST00000460160 TMEM208Q9BTX3 173 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 DKK2Q9UBU2 259 aa16.92■□□□□ 0.3
HOXB3-202ENST00000460160 SSNA1O43805 119 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 RHOBP62745 196 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 RPP25LQ8N5L8 163 aaKnown RBP16.91■□□□□ 0.3
HOXB3-202ENST00000460160 IGHV4-4A0A075B6R2 117 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 TRAV12-2A0A075B6T6 113 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 FAM222AQ5U5X8 452 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 RNF126Q9BV68 326 aa16.91■□□□□ 0.3
HOXB3-202ENST00000460160 CLINT1Q14677 625 aa16.9■□□□□ 0.3
HOXB3-202ENST00000460160 GCSAMLQ5JQS6 135 aa16.9■□□□□ 0.3
HOXB3-202ENST00000460160 YTHDF2Q9Y5A9 579 aaKnown RBP16.9■□□□□ 0.3
HOXB3-202ENST00000460160 DNAH10Q8IVF4 4471 aa16.9■□□□□ 0.3
HOXB3-202ENST00000460160 BIRC6Q9NR09 4857 aa16.89■□□□□ 0.29
HOXB3-202ENST00000460160 TEX48A0A1B0GUV7 120 aa16.89■□□□□ 0.29
HOXB3-202ENST00000460160 PRAC2D3DTV9 90 aa16.89■□□□□ 0.29
HOXB3-202ENST00000460160 PRM2P04554 102 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms